Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PtcraP0C6B2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PtcraP0C6B2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PtcraP0C6B2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.53■□□□□ 0.24
PtcraP0C6B2 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.53■□□□□ 0.24
PtcraP0C6B2 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PtcraP0C6B2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PtcraP0C6B2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PtcraP0C6B2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PtcraP0C6B2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PtcraP0C6B2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PtcraP0C6B2 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PtcraP0C6B2 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.52■□□□□ 0.24
PtcraP0C6B2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PtcraP0C6B2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.52■□□□□ 0.24
PtcraP0C6B2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PtcraP0C6B2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.52■□□□□ 0.24
PtcraP0C6B2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PtcraP0C6B2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PtcraP0C6B2 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PtcraP0C6B2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PtcraP0C6B2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PtcraP0C6B2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PtcraP0C6B2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PtcraP0C6B2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PtcraP0C6B2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PtcraP0C6B2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PtcraP0C6B2 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.51■□□□□ 0.23
PtcraP0C6B2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PtcraP0C6B2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PtcraP0C6B2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PtcraP0C6B2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PtcraP0C6B2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PtcraP0C6B2 Gm10493-201ENSMUST00000097270 612 ntBASIC16.51■□□□□ 0.23
PtcraP0C6B2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.51■□□□□ 0.23
PtcraP0C6B2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PtcraP0C6B2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PtcraP0C6B2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PtcraP0C6B2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PtcraP0C6B2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PtcraP0C6B2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PtcraP0C6B2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PtcraP0C6B2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PtcraP0C6B2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PtcraP0C6B2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PtcraP0C6B2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PtcraP0C6B2 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PtcraP0C6B2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PtcraP0C6B2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.5■□□□□ 0.23
PtcraP0C6B2 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PtcraP0C6B2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PtcraP0C6B2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PtcraP0C6B2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PtcraP0C6B2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PtcraP0C6B2 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PtcraP0C6B2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PtcraP0C6B2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PtcraP0C6B2 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PtcraP0C6B2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PtcraP0C6B2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PtcraP0C6B2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PtcraP0C6B2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PtcraP0C6B2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.49■□□□□ 0.23
PtcraP0C6B2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PtcraP0C6B2 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
PtcraP0C6B2 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PtcraP0C6B2 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PtcraP0C6B2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PtcraP0C6B2 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PtcraP0C6B2 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PtcraP0C6B2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.49■□□□□ 0.23
PtcraP0C6B2 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PtcraP0C6B2 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PtcraP0C6B2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PtcraP0C6B2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PtcraP0C6B2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PtcraP0C6B2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PtcraP0C6B2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PtcraP0C6B2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PtcraP0C6B2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PtcraP0C6B2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PtcraP0C6B2 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PtcraP0C6B2 Gm13146-201ENSMUST00000118508 780 ntBASIC16.48■□□□□ 0.23
PtcraP0C6B2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PtcraP0C6B2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.48■□□□□ 0.23
PtcraP0C6B2 Gm38205-201ENSMUST00000192243 258 ntBASIC16.48■□□□□ 0.23
PtcraP0C6B2 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.48■□□□□ 0.23
PtcraP0C6B2 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PtcraP0C6B2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
PtcraP0C6B2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PtcraP0C6B2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PtcraP0C6B2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PtcraP0C6B2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PtcraP0C6B2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PtcraP0C6B2 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PtcraP0C6B2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
PtcraP0C6B2 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.47■□□□□ 0.23
PtcraP0C6B2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.47■□□□□ 0.23
PtcraP0C6B2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PtcraP0C6B2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms