Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.68■□□□□ 0.9
Chmp6P0C0A3 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp6P0C0A3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp6P0C0A3 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.67■□□□□ 0.9
Chmp6P0C0A3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp6P0C0A3 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp6P0C0A3 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp6P0C0A3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp6P0C0A3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp6P0C0A3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp6P0C0A3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp6P0C0A3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp6P0C0A3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
Chmp6P0C0A3 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp6P0C0A3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp6P0C0A3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp6P0C0A3 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp6P0C0A3 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.66■□□□□ 0.9
Chmp6P0C0A3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Chmp6P0C0A3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp6P0C0A3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp6P0C0A3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp6P0C0A3 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp6P0C0A3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.65■□□□□ 0.9
Chmp6P0C0A3 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.65■□□□□ 0.9
Chmp6P0C0A3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.65■□□□□ 0.9
Chmp6P0C0A3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp6P0C0A3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Chmp6P0C0A3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Chmp6P0C0A3 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Chmp6P0C0A3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp6P0C0A3 Gm27801-201ENSMUST00000184174 223 ntBASIC20.64■□□□□ 0.89
Chmp6P0C0A3 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp6P0C0A3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp6P0C0A3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Chmp6P0C0A3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp6P0C0A3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Chmp6P0C0A3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp6P0C0A3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp6P0C0A3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp6P0C0A3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp6P0C0A3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp6P0C0A3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp6P0C0A3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp6P0C0A3 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.63■□□□□ 0.89
Chmp6P0C0A3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.63■□□□□ 0.89
Chmp6P0C0A3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp6P0C0A3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp6P0C0A3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp6P0C0A3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.62■□□□□ 0.89
Chmp6P0C0A3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp6P0C0A3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.62■□□□□ 0.89
Chmp6P0C0A3 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp6P0C0A3 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp6P0C0A3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
Chmp6P0C0A3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp6P0C0A3 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.62■□□□□ 0.89
Chmp6P0C0A3 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp6P0C0A3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.62■□□□□ 0.89
Chmp6P0C0A3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp6P0C0A3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp6P0C0A3 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp6P0C0A3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp6P0C0A3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp6P0C0A3 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Chmp6P0C0A3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp6P0C0A3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp6P0C0A3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp6P0C0A3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp6P0C0A3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.61■□□□□ 0.89
Chmp6P0C0A3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Chmp6P0C0A3 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.61■□□□□ 0.89
Chmp6P0C0A3 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp6P0C0A3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp6P0C0A3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp6P0C0A3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp6P0C0A3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
Chmp6P0C0A3 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Chmp6P0C0A3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Chmp6P0C0A3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp6P0C0A3 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp6P0C0A3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp6P0C0A3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Chmp6P0C0A3 Gm9988-201ENSMUST00000069786 435 ntBASIC20.6■□□□□ 0.89
Chmp6P0C0A3 Gm5874-201ENSMUST00000096101 508 ntBASIC20.6■□□□□ 0.89
Chmp6P0C0A3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chmp6P0C0A3 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Chmp6P0C0A3 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Chmp6P0C0A3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.59■□□□□ 0.89
Chmp6P0C0A3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp6P0C0A3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp6P0C0A3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Chmp6P0C0A3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp6P0C0A3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp6P0C0A3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chmp6P0C0A3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Chmp6P0C0A3 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Chmp6P0C0A3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Chmp6P0C0A3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chmp6P0C0A3 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms