Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.06■□□□□ 0.48
Sod1P08228 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sod1P08228 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sod1P08228 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sod1P08228 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sod1P08228 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Sod1P08228 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.05■□□□□ 0.48
Sod1P08228 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sod1P08228 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Sod1P08228 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.05■□□□□ 0.48
Sod1P08228 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sod1P08228 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Sod1P08228 Gm2559-201ENSMUST00000201323 363 ntBASIC18.05■□□□□ 0.48
Sod1P08228 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sod1P08228 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sod1P08228 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sod1P08228 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sod1P08228 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sod1P08228 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Sod1P08228 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Sod1P08228 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Sod1P08228 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sod1P08228 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sod1P08228 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sod1P08228 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sod1P08228 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sod1P08228 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sod1P08228 Gm5643-201ENSMUST00000117081 966 ntBASIC18.04■□□□□ 0.48
Sod1P08228 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.04■□□□□ 0.48
Sod1P08228 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.04■□□□□ 0.48
Sod1P08228 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.04■□□□□ 0.48
Sod1P08228 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.04■□□□□ 0.48
Sod1P08228 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Sod1P08228 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sod1P08228 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sod1P08228 Dio3-201ENSMUST00000097228 1449 ntBASIC18.04■□□□□ 0.48
Sod1P08228 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Sod1P08228 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.03■□□□□ 0.48
Sod1P08228 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sod1P08228 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sod1P08228 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sod1P08228 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sod1P08228 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Sod1P08228 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.02■□□□□ 0.48
Sod1P08228 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Sod1P08228 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sod1P08228 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sod1P08228 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Sod1P08228 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Sod1P08228 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Sod1P08228 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sod1P08228 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sod1P08228 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.01■□□□□ 0.47
Sod1P08228 Gm44549-201ENSMUST00000208351 577 ntBASIC18.01■□□□□ 0.47
Sod1P08228 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sod1P08228 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sod1P08228 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sod1P08228 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sod1P08228 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sod1P08228 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sod1P08228 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sod1P08228 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sod1P08228 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sod1P08228 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18■□□□□ 0.47
Sod1P08228 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sod1P08228 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sod1P08228 Gm43672-201ENSMUST00000199072 1731 ntBASIC18■□□□□ 0.47
Sod1P08228 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18■□□□□ 0.47
Sod1P08228 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sod1P08228 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sod1P08228 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sod1P08228 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sod1P08228 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sod1P08228 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sod1P08228 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sod1P08228 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sod1P08228 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.99■□□□□ 0.47
Sod1P08228 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Sod1P08228 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sod1P08228 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.99■□□□□ 0.47
Sod1P08228 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.99■□□□□ 0.47
Sod1P08228 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sod1P08228 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Sod1P08228 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sod1P08228 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sod1P08228 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sod1P08228 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sod1P08228 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.98■□□□□ 0.47
Sod1P08228 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.98■□□□□ 0.47
Sod1P08228 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Sod1P08228 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sod1P08228 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
Sod1P08228 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sod1P08228 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sod1P08228 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sod1P08228 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sod1P08228 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sod1P08228 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.97■□□□□ 0.47
Sod1P08228 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Sod1P08228 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms