Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PdgfrbP05622 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PdgfrbP05622 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PdgfrbP05622 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
PdgfrbP05622 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PdgfrbP05622 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PdgfrbP05622 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PdgfrbP05622 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PdgfrbP05622 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PdgfrbP05622 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PdgfrbP05622 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.21■□□□□ 0.67
PdgfrbP05622 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PdgfrbP05622 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PdgfrbP05622 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PdgfrbP05622 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.21■□□□□ 0.67
PdgfrbP05622 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.21■□□□□ 0.67
PdgfrbP05622 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PdgfrbP05622 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PdgfrbP05622 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.21■□□□□ 0.67
PdgfrbP05622 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PdgfrbP05622 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PdgfrbP05622 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PdgfrbP05622 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PdgfrbP05622 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PdgfrbP05622 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PdgfrbP05622 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PdgfrbP05622 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PdgfrbP05622 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PdgfrbP05622 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.2■□□□□ 0.66
PdgfrbP05622 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
PdgfrbP05622 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
PdgfrbP05622 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.2■□□□□ 0.66
PdgfrbP05622 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PdgfrbP05622 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PdgfrbP05622 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PdgfrbP05622 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PdgfrbP05622 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PdgfrbP05622 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PdgfrbP05622 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PdgfrbP05622 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.19■□□□□ 0.66
PdgfrbP05622 Gm7860-201ENSMUST00000121190 879 ntBASIC19.19■□□□□ 0.66
PdgfrbP05622 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PdgfrbP05622 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.19■□□□□ 0.66
PdgfrbP05622 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.19■□□□□ 0.66
PdgfrbP05622 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PdgfrbP05622 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PdgfrbP05622 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PdgfrbP05622 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PdgfrbP05622 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PdgfrbP05622 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PdgfrbP05622 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.18■□□□□ 0.66
PdgfrbP05622 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PdgfrbP05622 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.18■□□□□ 0.66
PdgfrbP05622 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PdgfrbP05622 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PdgfrbP05622 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.18■□□□□ 0.66
PdgfrbP05622 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PdgfrbP05622 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PdgfrbP05622 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PdgfrbP05622 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PdgfrbP05622 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PdgfrbP05622 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PdgfrbP05622 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PdgfrbP05622 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PdgfrbP05622 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PdgfrbP05622 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PdgfrbP05622 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PdgfrbP05622 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PdgfrbP05622 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PdgfrbP05622 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PdgfrbP05622 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PdgfrbP05622 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.17■□□□□ 0.66
PdgfrbP05622 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PdgfrbP05622 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PdgfrbP05622 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PdgfrbP05622 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PdgfrbP05622 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PdgfrbP05622 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PdgfrbP05622 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PdgfrbP05622 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PdgfrbP05622 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PdgfrbP05622 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PdgfrbP05622 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PdgfrbP05622 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PdgfrbP05622 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PdgfrbP05622 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.16■□□□□ 0.66
PdgfrbP05622 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PdgfrbP05622 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PdgfrbP05622 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PdgfrbP05622 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PdgfrbP05622 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PdgfrbP05622 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.15■□□□□ 0.66
PdgfrbP05622 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PdgfrbP05622 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PdgfrbP05622 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.15■□□□□ 0.66
PdgfrbP05622 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PdgfrbP05622 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
PdgfrbP05622 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PdgfrbP05622 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PdgfrbP05622 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms