Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cd74P04441 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cd74P04441 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cd74P04441 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cd74P04441 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Cd74P04441 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cd74P04441 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cd74P04441 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
Cd74P04441 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Cd74P04441 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC15.92■□□□□ 0.14
Cd74P04441 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Cd74P04441 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.92■□□□□ 0.14
Cd74P04441 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cd74P04441 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cd74P04441 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cd74P04441 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Cd74P04441 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Cd74P04441 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC15.92■□□□□ 0.14
Cd74P04441 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.91■□□□□ 0.14
Cd74P04441 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cd74P04441 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Cd74P04441 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cd74P04441 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cd74P04441 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cd74P04441 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cd74P04441 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cd74P04441 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.91■□□□□ 0.14
Cd74P04441 Gm40848-201ENSMUST00000221998 324 ntBASIC15.91■□□□□ 0.14
Cd74P04441 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cd74P04441 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cd74P04441 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Cd74P04441 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
Cd74P04441 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cd74P04441 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cd74P04441 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cd74P04441 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cd74P04441 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cd74P04441 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
Cd74P04441 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Cd74P04441 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cd74P04441 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cd74P04441 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cd74P04441 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cd74P04441 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cd74P04441 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cd74P04441 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC15.9■□□□□ 0.14
Cd74P04441 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cd74P04441 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cd74P04441 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC15.9■□□□□ 0.14
Cd74P04441 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cd74P04441 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Cd74P04441 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Cd74P04441 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Cd74P04441 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cd74P04441 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cd74P04441 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cd74P04441 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.89■□□□□ 0.13
Cd74P04441 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cd74P04441 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cd74P04441 Gm43548-201ENSMUST00000197139 2353 ntBASIC15.89■□□□□ 0.13
Cd74P04441 Gm11421-201ENSMUST00000122124 294 ntBASIC15.89■□□□□ 0.13
Cd74P04441 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Cd74P04441 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC15.89■□□□□ 0.13
Cd74P04441 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Cd74P04441 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cd74P04441 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cd74P04441 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cd74P04441 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cd74P04441 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cd74P04441 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cd74P04441 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Cd74P04441 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cd74P04441 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cd74P04441 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cd74P04441 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cd74P04441 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cd74P04441 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cd74P04441 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cd74P04441 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.88■□□□□ 0.13
Cd74P04441 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Cd74P04441 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cd74P04441 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.87■□□□□ 0.13
Cd74P04441 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cd74P04441 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cd74P04441 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cd74P04441 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cd74P04441 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cd74P04441 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cd74P04441 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cd74P04441 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
Cd74P04441 AC137127.1-201ENSMUST00000213466 1078 ntBASIC15.87■□□□□ 0.13
Cd74P04441 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC15.87■□□□□ 0.13
Cd74P04441 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Cd74P04441 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Cd74P04441 Golph3-205ENSMUST00000228671 2842 ntBASIC15.87■□□□□ 0.13
Cd74P04441 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cd74P04441 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cd74P04441 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cd74P04441 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.87■□□□□ 0.13
Cd74P04441 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms