Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hoxa3P02831 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hoxa3P02831 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hoxa3P02831 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Hoxa3P02831 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Hoxa3P02831 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC15.92■□□□□ 0.14
Hoxa3P02831 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Hoxa3P02831 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hoxa3P02831 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hoxa3P02831 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Hoxa3P02831 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Hoxa3P02831 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hoxa3P02831 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Hoxa3P02831 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hoxa3P02831 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
Hoxa3P02831 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hoxa3P02831 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Hoxa3P02831 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hoxa3P02831 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Hoxa3P02831 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Hoxa3P02831 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.91■□□□□ 0.14
Hoxa3P02831 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.91■□□□□ 0.14
Hoxa3P02831 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hoxa3P02831 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hoxa3P02831 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hoxa3P02831 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Hoxa3P02831 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hoxa3P02831 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hoxa3P02831 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.91■□□□□ 0.14
Hoxa3P02831 Ap3s1-204ENSMUST00000225520 957 ntBASIC15.91■□□□□ 0.14
Hoxa3P02831 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Hoxa3P02831 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.91■□□□□ 0.14
Hoxa3P02831 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hoxa3P02831 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hoxa3P02831 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hoxa3P02831 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hoxa3P02831 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hoxa3P02831 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hoxa3P02831 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.9■□□□□ 0.14
Hoxa3P02831 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Hoxa3P02831 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hoxa3P02831 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hoxa3P02831 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hoxa3P02831 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hoxa3P02831 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Hoxa3P02831 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Hoxa3P02831 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hoxa3P02831 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.89■□□□□ 0.13
Hoxa3P02831 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC15.89■□□□□ 0.13
Hoxa3P02831 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC15.89■□□□□ 0.13
Hoxa3P02831 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hoxa3P02831 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Hoxa3P02831 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC15.89■□□□□ 0.13
Hoxa3P02831 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Hoxa3P02831 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Hoxa3P02831 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.89■□□□□ 0.13
Hoxa3P02831 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.89■□□□□ 0.13
Hoxa3P02831 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.89■□□□□ 0.13
Hoxa3P02831 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Hoxa3P02831 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.89■□□□□ 0.13
Hoxa3P02831 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hoxa3P02831 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hoxa3P02831 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Hoxa3P02831 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hoxa3P02831 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Hoxa3P02831 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Hoxa3P02831 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hoxa3P02831 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hoxa3P02831 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC15.88■□□□□ 0.13
Hoxa3P02831 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.88■□□□□ 0.13
Hoxa3P02831 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hoxa3P02831 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Hoxa3P02831 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hoxa3P02831 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hoxa3P02831 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hoxa3P02831 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hoxa3P02831 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hoxa3P02831 Gm43545-201ENSMUST00000196765 2779 ntBASIC15.87■□□□□ 0.13
Hoxa3P02831 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hoxa3P02831 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hoxa3P02831 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hoxa3P02831 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Hoxa3P02831 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hoxa3P02831 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hoxa3P02831 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Hoxa3P02831 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hoxa3P02831 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hoxa3P02831 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hoxa3P02831 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hoxa3P02831 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hoxa3P02831 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxa3P02831 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxa3P02831 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxa3P02831 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxa3P02831 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Hoxa3P02831 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxa3P02831 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Hoxa3P02831 Gm38205-201ENSMUST00000192243 258 ntBASIC15.86■□□□□ 0.13
Hoxa3P02831 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Hoxa3P02831 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms