Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.36■□□□□ 0.37
P01852 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P01852 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.36■□□□□ 0.37
P01852 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P01852 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
P01852 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
P01852 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
P01852 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
P01852 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
P01852 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P01852 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.35■□□□□ 0.37
P01852 Gm42642-201ENSMUST00000200683 355 ntBASIC17.35■□□□□ 0.37
P01852 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
P01852 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
P01852 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P01852 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
P01852 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.35■□□□□ 0.37
P01852 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
P01852 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
P01852 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
P01852 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
P01852 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.34■□□□□ 0.37
P01852 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
P01852 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
P01852 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
P01852 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
P01852 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
P01852 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
P01852 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
P01852 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
P01852 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
P01852 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
P01852 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
P01852 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
P01852 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
P01852 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
P01852 Gm18671-201ENSMUST00000214826 683 ntBASIC17.33■□□□□ 0.36
P01852 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.33■□□□□ 0.36
P01852 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
P01852 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
P01852 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01852 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01852 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
P01852 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01852 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01852 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01852 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01852 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
P01852 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
P01852 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.32■□□□□ 0.36
P01852 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
P01852 Reep4-203ENSMUST00000226563 1444 ntBASIC17.31■□□□□ 0.36
P01852 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P01852 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P01852 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
P01852 Gm13234-201ENSMUST00000120010 747 ntBASIC17.31■□□□□ 0.36
P01852 Gm10033-202ENSMUST00000211874 928 ntBASIC17.31■□□□□ 0.36
P01852 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
P01852 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
P01852 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
P01852 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P01852 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
P01852 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
P01852 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.3■□□□□ 0.36
P01852 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.3■□□□□ 0.36
P01852 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
P01852 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
P01852 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
P01852 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
P01852 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
P01852 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
P01852 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P01852 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P01852 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
P01852 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
P01852 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
P01852 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
P01852 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P01852 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
P01852 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
P01852 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P01852 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
P01852 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
P01852 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P01852 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
P01852 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.29■□□□□ 0.36
P01852 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P01852 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.28■□□□□ 0.36
P01852 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.28■□□□□ 0.36
P01852 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
P01852 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.28■□□□□ 0.36
P01852 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
P01852 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P01852 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P01852 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
P01852 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P01852 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
P01852 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P01852 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P01852 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms