Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm45606-201ENSMUST00000209836 2795 ntBASIC13.89□□□□□ -0.19
TcraP01849 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TcraP01849 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TcraP01849 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TcraP01849 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TcraP01849 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TcraP01849 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TcraP01849 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TcraP01849 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TcraP01849 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TcraP01849 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
TcraP01849 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TcraP01849 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TcraP01849 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TcraP01849 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TcraP01849 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TcraP01849 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TcraP01849 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC13.88□□□□□ -0.19
TcraP01849 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TcraP01849 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC13.88□□□□□ -0.19
TcraP01849 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TcraP01849 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
TcraP01849 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TcraP01849 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TcraP01849 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TcraP01849 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TcraP01849 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TcraP01849 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TcraP01849 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TcraP01849 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TcraP01849 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TcraP01849 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TcraP01849 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TcraP01849 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TcraP01849 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TcraP01849 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
TcraP01849 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TcraP01849 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TcraP01849 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TcraP01849 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TcraP01849 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TcraP01849 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TcraP01849 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TcraP01849 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TcraP01849 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TcraP01849 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TcraP01849 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TcraP01849 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TcraP01849 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TcraP01849 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TcraP01849 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TcraP01849 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TcraP01849 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TcraP01849 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TcraP01849 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TcraP01849 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TcraP01849 Cdkn3-203ENSMUST00000227149 1952 ntBASIC13.86□□□□□ -0.19
TcraP01849 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC13.86□□□□□ -0.19
TcraP01849 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TcraP01849 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TcraP01849 Gm5921-201ENSMUST00000075898 882 ntBASIC13.86□□□□□ -0.19
TcraP01849 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TcraP01849 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TcraP01849 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TcraP01849 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TcraP01849 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TcraP01849 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TcraP01849 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TcraP01849 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TcraP01849 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TcraP01849 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TcraP01849 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TcraP01849 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TcraP01849 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TcraP01849 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TcraP01849 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
TcraP01849 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TcraP01849 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC13.85□□□□□ -0.19
TcraP01849 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC13.85□□□□□ -0.19
TcraP01849 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
TcraP01849 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC13.85□□□□□ -0.19
TcraP01849 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TcraP01849 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TcraP01849 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC13.85□□□□□ -0.19
TcraP01849 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.85□□□□□ -0.19
TcraP01849 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TcraP01849 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TcraP01849 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
TcraP01849 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
TcraP01849 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC13.84□□□□□ -0.19
TcraP01849 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TcraP01849 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TcraP01849 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TcraP01849 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TcraP01849 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC13.84□□□□□ -0.19
TcraP01849 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TcraP01849 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TcraP01849 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TcraP01849 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TcraP01849 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms