Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vti1aO89116 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Vti1aO89116 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Vti1aO89116 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Vti1aO89116 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Vti1aO89116 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vti1aO89116 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vti1aO89116 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vti1aO89116 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vti1aO89116 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vti1aO89116 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vti1aO89116 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vti1aO89116 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vti1aO89116 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Vti1aO89116 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.51■□□□□ 0.87
Vti1aO89116 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vti1aO89116 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.5■□□□□ 0.87
Vti1aO89116 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vti1aO89116 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.5■□□□□ 0.87
Vti1aO89116 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Vti1aO89116 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vti1aO89116 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vti1aO89116 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vti1aO89116 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vti1aO89116 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vti1aO89116 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vti1aO89116 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Vti1aO89116 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vti1aO89116 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Vti1aO89116 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.49■□□□□ 0.87
Vti1aO89116 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.49■□□□□ 0.87
Vti1aO89116 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vti1aO89116 Gm12441-201ENSMUST00000121806 588 ntBASIC20.49■□□□□ 0.87
Vti1aO89116 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.49■□□□□ 0.87
Vti1aO89116 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vti1aO89116 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vti1aO89116 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vti1aO89116 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.49■□□□□ 0.87
Vti1aO89116 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vti1aO89116 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vti1aO89116 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vti1aO89116 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Vti1aO89116 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.49■□□□□ 0.87
Vti1aO89116 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Vti1aO89116 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Vti1aO89116 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Vti1aO89116 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vti1aO89116 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Vti1aO89116 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Vti1aO89116 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.48■□□□□ 0.87
Vti1aO89116 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vti1aO89116 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vti1aO89116 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vti1aO89116 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Vti1aO89116 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Vti1aO89116 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vti1aO89116 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vti1aO89116 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.47■□□□□ 0.87
Vti1aO89116 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Vti1aO89116 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.47■□□□□ 0.87
Vti1aO89116 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Vti1aO89116 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vti1aO89116 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vti1aO89116 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vti1aO89116 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.46■□□□□ 0.87
Vti1aO89116 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vti1aO89116 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vti1aO89116 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Vti1aO89116 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vti1aO89116 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vti1aO89116 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Vti1aO89116 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.46■□□□□ 0.87
Vti1aO89116 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vti1aO89116 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vti1aO89116 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vti1aO89116 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vti1aO89116 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vti1aO89116 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Vti1aO89116 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.45■□□□□ 0.87
Vti1aO89116 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vti1aO89116 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Vti1aO89116 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Vti1aO89116 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.45■□□□□ 0.86
Vti1aO89116 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vti1aO89116 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Vti1aO89116 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.45■□□□□ 0.86
Vti1aO89116 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Vti1aO89116 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vti1aO89116 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.45■□□□□ 0.86
Vti1aO89116 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Vti1aO89116 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vti1aO89116 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vti1aO89116 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Vti1aO89116 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vti1aO89116 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vti1aO89116 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
Vti1aO89116 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.44■□□□□ 0.86
Vti1aO89116 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Vti1aO89116 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vti1aO89116 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms