Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abcd4O89016 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Abcd4O89016 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abcd4O89016 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abcd4O89016 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abcd4O89016 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.16■□□□□ 0.34
Abcd4O89016 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.16■□□□□ 0.34
Abcd4O89016 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abcd4O89016 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abcd4O89016 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Abcd4O89016 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abcd4O89016 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abcd4O89016 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abcd4O89016 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abcd4O89016 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abcd4O89016 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abcd4O89016 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Abcd4O89016 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Abcd4O89016 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Abcd4O89016 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Abcd4O89016 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Abcd4O89016 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.15■□□□□ 0.34
Abcd4O89016 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Abcd4O89016 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.15■□□□□ 0.34
Abcd4O89016 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.15■□□□□ 0.34
Abcd4O89016 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Abcd4O89016 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Abcd4O89016 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Abcd4O89016 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Abcd4O89016 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Abcd4O89016 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Abcd4O89016 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Abcd4O89016 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Abcd4O89016 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Abcd4O89016 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Abcd4O89016 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Abcd4O89016 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Abcd4O89016 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Abcd4O89016 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.14■□□□□ 0.33
Abcd4O89016 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.14■□□□□ 0.33
Abcd4O89016 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Abcd4O89016 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Abcd4O89016 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Abcd4O89016 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Abcd4O89016 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Abcd4O89016 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Abcd4O89016 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Abcd4O89016 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Abcd4O89016 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.13■□□□□ 0.33
Abcd4O89016 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.13■□□□□ 0.33
Abcd4O89016 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.13■□□□□ 0.33
Abcd4O89016 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Abcd4O89016 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Abcd4O89016 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Abcd4O89016 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Abcd4O89016 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Abcd4O89016 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Abcd4O89016 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Abcd4O89016 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Abcd4O89016 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Abcd4O89016 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Abcd4O89016 Gm10602-201ENSMUST00000098239 609 ntBASIC17.12■□□□□ 0.33
Abcd4O89016 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Abcd4O89016 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Abcd4O89016 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Abcd4O89016 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Abcd4O89016 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Abcd4O89016 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Abcd4O89016 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Abcd4O89016 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Abcd4O89016 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Abcd4O89016 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Abcd4O89016 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Abcd4O89016 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.1■□□□□ 0.33
Abcd4O89016 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Abcd4O89016 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Abcd4O89016 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Abcd4O89016 Gm12933-201ENSMUST00000120203 872 ntBASIC17.1■□□□□ 0.33
Abcd4O89016 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Abcd4O89016 Gm7514-201ENSMUST00000209475 934 ntBASIC17.1■□□□□ 0.33
Abcd4O89016 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.1■□□□□ 0.33
Abcd4O89016 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.1■□□□□ 0.33
Abcd4O89016 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Abcd4O89016 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Abcd4O89016 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.1■□□□□ 0.33
Abcd4O89016 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Abcd4O89016 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Abcd4O89016 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Abcd4O89016 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Abcd4O89016 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Abcd4O89016 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Abcd4O89016 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.09■□□□□ 0.33
Abcd4O89016 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.09■□□□□ 0.33
Abcd4O89016 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Abcd4O89016 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.09■□□□□ 0.33
Abcd4O89016 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Abcd4O89016 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Abcd4O89016 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Abcd4O89016 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Abcd4O89016 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms