Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Gm10175-202ENSMUST00000208752 441 ntBASIC19.69■□□□□ 0.74
Syn1O88935 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.69■□□□□ 0.74
Syn1O88935 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Syn1O88935 Gm7367-201ENSMUST00000057611 492 ntBASIC19.69■□□□□ 0.74
Syn1O88935 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Syn1O88935 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Syn1O88935 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Syn1O88935 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Syn1O88935 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Syn1O88935 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Syn1O88935 Mir1199-201ENSMUST00000117015 119 ntBASIC19.68■□□□□ 0.74
Syn1O88935 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Syn1O88935 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.68■□□□□ 0.74
Syn1O88935 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Syn1O88935 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Syn1O88935 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Syn1O88935 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Syn1O88935 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.67■□□□□ 0.74
Syn1O88935 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.67■□□□□ 0.74
Syn1O88935 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Syn1O88935 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Syn1O88935 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Syn1O88935 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Syn1O88935 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Syn1O88935 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Syn1O88935 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Syn1O88935 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Syn1O88935 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Syn1O88935 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Syn1O88935 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Syn1O88935 Gm15378-201ENSMUST00000121894 207 ntBASIC19.66■□□□□ 0.74
Syn1O88935 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.66■□□□□ 0.74
Syn1O88935 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Syn1O88935 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.66■□□□□ 0.74
Syn1O88935 Gm43799-201ENSMUST00000201845 579 ntBASIC19.66■□□□□ 0.74
Syn1O88935 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.66■□□□□ 0.74
Syn1O88935 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.66■□□□□ 0.74
Syn1O88935 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Syn1O88935 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Syn1O88935 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Syn1O88935 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Syn1O88935 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Syn1O88935 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Syn1O88935 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Syn1O88935 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Syn1O88935 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Syn1O88935 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Syn1O88935 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Syn1O88935 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Syn1O88935 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Syn1O88935 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Syn1O88935 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Syn1O88935 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Syn1O88935 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Syn1O88935 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Syn1O88935 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Syn1O88935 Gm11249-201ENSMUST00000117071 859 ntBASIC19.64■□□□□ 0.73
Syn1O88935 Gm6433-201ENSMUST00000118634 875 ntBASIC19.64■□□□□ 0.73
Syn1O88935 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Syn1O88935 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Syn1O88935 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.64■□□□□ 0.73
Syn1O88935 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Syn1O88935 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Syn1O88935 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Syn1O88935 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Syn1O88935 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Syn1O88935 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.73
Syn1O88935 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Syn1O88935 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.63■□□□□ 0.73
Syn1O88935 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Syn1O88935 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Syn1O88935 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Syn1O88935 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.63■□□□□ 0.73
Syn1O88935 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Syn1O88935 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.63■□□□□ 0.73
Syn1O88935 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Syn1O88935 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Syn1O88935 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Syn1O88935 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Syn1O88935 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Syn1O88935 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Syn1O88935 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Syn1O88935 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Syn1O88935 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Syn1O88935 Gm27741-201ENSMUST00000185060 237 ntBASIC19.62■□□□□ 0.73
Syn1O88935 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Syn1O88935 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Syn1O88935 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Syn1O88935 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Syn1O88935 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Syn1O88935 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Syn1O88935 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
Syn1O88935 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Syn1O88935 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.61■□□□□ 0.73
Syn1O88935 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Syn1O88935 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
Syn1O88935 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Syn1O88935 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Syn1O88935 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Syn1O88935 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms