Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hdac3O88895 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hdac3O88895 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hdac3O88895 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Hdac3O88895 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hdac3O88895 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hdac3O88895 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hdac3O88895 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Hdac3O88895 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hdac3O88895 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hdac3O88895 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Hdac3O88895 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hdac3O88895 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hdac3O88895 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hdac3O88895 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hdac3O88895 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.94■□□□□ 0.3
Hdac3O88895 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hdac3O88895 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Hdac3O88895 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hdac3O88895 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hdac3O88895 Mir7075-201ENSMUST00000184187 82 ntBASIC16.94■□□□□ 0.3
Hdac3O88895 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hdac3O88895 AA386476-201ENSMUST00000098781 1665 ntBASIC16.94■□□□□ 0.3
Hdac3O88895 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hdac3O88895 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hdac3O88895 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Hdac3O88895 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Hdac3O88895 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hdac3O88895 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hdac3O88895 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hdac3O88895 Gm27454-201ENSMUST00000185090 204 ntBASIC16.93■□□□□ 0.3
Hdac3O88895 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hdac3O88895 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.93■□□□□ 0.3
Hdac3O88895 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hdac3O88895 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hdac3O88895 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hdac3O88895 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hdac3O88895 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hdac3O88895 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.93■□□□□ 0.3
Hdac3O88895 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hdac3O88895 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Hdac3O88895 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hdac3O88895 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.92■□□□□ 0.3
Hdac3O88895 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.92■□□□□ 0.3
Hdac3O88895 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hdac3O88895 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hdac3O88895 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hdac3O88895 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hdac3O88895 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hdac3O88895 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hdac3O88895 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hdac3O88895 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hdac3O88895 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Hdac3O88895 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hdac3O88895 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hdac3O88895 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.91■□□□□ 0.3
Hdac3O88895 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hdac3O88895 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hdac3O88895 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hdac3O88895 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hdac3O88895 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hdac3O88895 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hdac3O88895 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Hdac3O88895 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hdac3O88895 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.91■□□□□ 0.3
Hdac3O88895 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hdac3O88895 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
Hdac3O88895 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hdac3O88895 Rarb-207ENSMUST00000225921 2756 ntBASIC16.9■□□□□ 0.3
Hdac3O88895 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hdac3O88895 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hdac3O88895 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Hdac3O88895 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.9■□□□□ 0.3
Hdac3O88895 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hdac3O88895 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hdac3O88895 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hdac3O88895 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hdac3O88895 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hdac3O88895 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hdac3O88895 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Hdac3O88895 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Hdac3O88895 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hdac3O88895 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hdac3O88895 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hdac3O88895 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hdac3O88895 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.89■□□□□ 0.29
Hdac3O88895 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hdac3O88895 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Hdac3O88895 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hdac3O88895 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.89■□□□□ 0.29
Hdac3O88895 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Hdac3O88895 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.89■□□□□ 0.29
Hdac3O88895 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.89■□□□□ 0.29
Hdac3O88895 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hdac3O88895 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hdac3O88895 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Hdac3O88895 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hdac3O88895 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hdac3O88895 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hdac3O88895 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms