Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2d1aO88890 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2d1aO88890 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2d1aO88890 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2d1aO88890 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Sh2d1aO88890 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2d1aO88890 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC13.41□□□□□ -0.26
Sh2d1aO88890 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC13.41□□□□□ -0.26
Sh2d1aO88890 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2d1aO88890 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC13.41□□□□□ -0.26
Sh2d1aO88890 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Sh2d1aO88890 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2d1aO88890 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC13.41□□□□□ -0.26
Sh2d1aO88890 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2d1aO88890 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Sh2d1aO88890 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2d1aO88890 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Sh2d1aO88890 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2d1aO88890 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2d1aO88890 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Sh2d1aO88890 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Sh2d1aO88890 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2d1aO88890 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2d1aO88890 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Sh2d1aO88890 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Sh2d1aO88890 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Sh2d1aO88890 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh2d1aO88890 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh2d1aO88890 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh2d1aO88890 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh2d1aO88890 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh2d1aO88890 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sh2d1aO88890 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Sh2d1aO88890 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Sh2d1aO88890 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sh2d1aO88890 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh2d1aO88890 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh2d1aO88890 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sh2d1aO88890 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Sh2d1aO88890 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC13.4□□□□□ -0.26
Sh2d1aO88890 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sh2d1aO88890 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC13.4□□□□□ -0.26
Sh2d1aO88890 Spcs1-204ENSMUST00000226782 949 ntBASIC13.4□□□□□ -0.26
Sh2d1aO88890 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sh2d1aO88890 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Sh2d1aO88890 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh2d1aO88890 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh2d1aO88890 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh2d1aO88890 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sh2d1aO88890 Gm38342-201ENSMUST00000195710 2980 ntBASIC13.4□□□□□ -0.26
Sh2d1aO88890 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh2d1aO88890 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Sh2d1aO88890 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh2d1aO88890 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh2d1aO88890 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Sh2d1aO88890 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Sh2d1aO88890 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Sh2d1aO88890 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh2d1aO88890 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh2d1aO88890 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh2d1aO88890 Gm12251-201ENSMUST00000117893 792 ntBASIC13.39□□□□□ -0.27
Sh2d1aO88890 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC13.39□□□□□ -0.27
Sh2d1aO88890 AC154266.1-201ENSMUST00000223190 503 ntBASIC13.39□□□□□ -0.27
Sh2d1aO88890 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh2d1aO88890 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh2d1aO88890 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC13.39□□□□□ -0.27
Sh2d1aO88890 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sh2d1aO88890 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Sh2d1aO88890 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC13.39□□□□□ -0.27
Sh2d1aO88890 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh2d1aO88890 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh2d1aO88890 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh2d1aO88890 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh2d1aO88890 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh2d1aO88890 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sh2d1aO88890 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh2d1aO88890 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sh2d1aO88890 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh2d1aO88890 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sh2d1aO88890 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh2d1aO88890 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Sh2d1aO88890 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh2d1aO88890 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh2d1aO88890 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh2d1aO88890 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh2d1aO88890 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh2d1aO88890 Mir7075-201ENSMUST00000184187 82 ntBASIC13.38□□□□□ -0.27
Sh2d1aO88890 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC13.38□□□□□ -0.27
Sh2d1aO88890 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh2d1aO88890 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Sh2d1aO88890 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh2d1aO88890 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh2d1aO88890 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Sh2d1aO88890 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sh2d1aO88890 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh2d1aO88890 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Sh2d1aO88890 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sh2d1aO88890 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sh2d1aO88890 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Sh2d1aO88890 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms