Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.15■□□□□ 0.5
Hcn1O88704 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.15■□□□□ 0.5
Hcn1O88704 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hcn1O88704 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hcn1O88704 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hcn1O88704 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hcn1O88704 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hcn1O88704 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Hcn1O88704 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hcn1O88704 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hcn1O88704 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Hcn1O88704 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Hcn1O88704 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Hcn1O88704 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hcn1O88704 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Hcn1O88704 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hcn1O88704 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hcn1O88704 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hcn1O88704 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hcn1O88704 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hcn1O88704 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hcn1O88704 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hcn1O88704 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hcn1O88704 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hcn1O88704 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hcn1O88704 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.13■□□□□ 0.49
Hcn1O88704 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.13■□□□□ 0.49
Hcn1O88704 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hcn1O88704 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
Hcn1O88704 Gm40848-201ENSMUST00000221998 324 ntBASIC18.13■□□□□ 0.49
Hcn1O88704 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Hcn1O88704 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hcn1O88704 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Hcn1O88704 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Hcn1O88704 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hcn1O88704 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hcn1O88704 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.12■□□□□ 0.49
Hcn1O88704 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Hcn1O88704 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.12■□□□□ 0.49
Hcn1O88704 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hcn1O88704 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hcn1O88704 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.12■□□□□ 0.49
Hcn1O88704 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Hcn1O88704 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hcn1O88704 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.12■□□□□ 0.49
Hcn1O88704 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hcn1O88704 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hcn1O88704 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hcn1O88704 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Hcn1O88704 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hcn1O88704 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hcn1O88704 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Hcn1O88704 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Hcn1O88704 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hcn1O88704 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hcn1O88704 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hcn1O88704 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.11■□□□□ 0.49
Hcn1O88704 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hcn1O88704 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Hcn1O88704 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hcn1O88704 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.11■□□□□ 0.49
Hcn1O88704 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hcn1O88704 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hcn1O88704 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hcn1O88704 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hcn1O88704 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Hcn1O88704 Rarb-207ENSMUST00000225921 2756 ntBASIC18.1■□□□□ 0.49
Hcn1O88704 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Hcn1O88704 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Hcn1O88704 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hcn1O88704 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hcn1O88704 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hcn1O88704 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hcn1O88704 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hcn1O88704 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hcn1O88704 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Hcn1O88704 Gm43060-201ENSMUST00000200621 289 ntBASIC18.1■□□□□ 0.49
Hcn1O88704 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hcn1O88704 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Hcn1O88704 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.1■□□□□ 0.49
Hcn1O88704 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Hcn1O88704 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Hcn1O88704 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hcn1O88704 Gm11421-201ENSMUST00000122124 294 ntBASIC18.09■□□□□ 0.49
Hcn1O88704 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hcn1O88704 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hcn1O88704 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hcn1O88704 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hcn1O88704 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hcn1O88704 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hcn1O88704 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Hcn1O88704 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hcn1O88704 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hcn1O88704 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Hcn1O88704 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hcn1O88704 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hcn1O88704 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Hcn1O88704 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hcn1O88704 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hcn1O88704 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms