Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Becn1O88597 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Becn1O88597 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.74■■□□□ 1.07
Becn1O88597 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Becn1O88597 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21.74■■□□□ 1.07
Becn1O88597 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Becn1O88597 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.74■■□□□ 1.07
Becn1O88597 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.74■■□□□ 1.07
Becn1O88597 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.74■■□□□ 1.07
Becn1O88597 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Becn1O88597 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Becn1O88597 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Becn1O88597 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Becn1O88597 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Becn1O88597 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Becn1O88597 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Becn1O88597 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Becn1O88597 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Becn1O88597 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Becn1O88597 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Becn1O88597 Gm14117-201ENSMUST00000122417 843 ntBASIC21.73■■□□□ 1.07
Becn1O88597 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Becn1O88597 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Becn1O88597 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Becn1O88597 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC21.73■■□□□ 1.07
Becn1O88597 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Becn1O88597 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Becn1O88597 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Becn1O88597 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Becn1O88597 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Becn1O88597 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.72■■□□□ 1.07
Becn1O88597 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.72■■□□□ 1.07
Becn1O88597 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Becn1O88597 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Becn1O88597 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Becn1O88597 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Becn1O88597 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Becn1O88597 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Becn1O88597 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Becn1O88597 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.71■■□□□ 1.07
Becn1O88597 Gm40881-201ENSMUST00000223397 166 ntBASIC21.71■■□□□ 1.07
Becn1O88597 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Becn1O88597 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Becn1O88597 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Becn1O88597 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Becn1O88597 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Becn1O88597 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Becn1O88597 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Becn1O88597 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Becn1O88597 Gm37811-201ENSMUST00000192416 2601 ntBASIC21.7■■□□□ 1.06
Becn1O88597 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Becn1O88597 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.7■■□□□ 1.06
Becn1O88597 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Becn1O88597 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Becn1O88597 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Becn1O88597 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Becn1O88597 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Becn1O88597 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Becn1O88597 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Becn1O88597 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Becn1O88597 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.69■■□□□ 1.06
Becn1O88597 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.69■■□□□ 1.06
Becn1O88597 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.69■■□□□ 1.06
Becn1O88597 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Becn1O88597 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Becn1O88597 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Becn1O88597 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Becn1O88597 Rncr4-201ENSMUST00000194541 2234 ntBASIC21.68■■□□□ 1.06
Becn1O88597 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Becn1O88597 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.68■■□□□ 1.06
Becn1O88597 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.68■■□□□ 1.06
Becn1O88597 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Becn1O88597 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC21.68■■□□□ 1.06
Becn1O88597 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Becn1O88597 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Becn1O88597 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Becn1O88597 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Becn1O88597 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Becn1O88597 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Becn1O88597 Gm7417-201ENSMUST00000192950 473 ntBASIC21.67■■□□□ 1.06
Becn1O88597 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Becn1O88597 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Becn1O88597 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Becn1O88597 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.66■■□□□ 1.06
Becn1O88597 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Becn1O88597 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Becn1O88597 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Becn1O88597 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Becn1O88597 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Becn1O88597 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Becn1O88597 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Becn1O88597 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Becn1O88597 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Becn1O88597 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Becn1O88597 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Becn1O88597 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Becn1O88597 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC21.65■■□□□ 1.06
Becn1O88597 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.65■■□□□ 1.06
Becn1O88597 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Becn1O88597 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms