Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cldn1O88551 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cldn1O88551 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
Cldn1O88551 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cldn1O88551 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn1O88551 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
Cldn1O88551 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn1O88551 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn1O88551 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.28■□□□□ 0.2
Cldn1O88551 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn1O88551 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn1O88551 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn1O88551 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cldn1O88551 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn1O88551 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn1O88551 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn1O88551 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Cldn1O88551 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Cldn1O88551 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn1O88551 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cldn1O88551 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Cldn1O88551 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cldn1O88551 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cldn1O88551 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.19
Cldn1O88551 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Cldn1O88551 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cldn1O88551 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cldn1O88551 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cldn1O88551 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn1O88551 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn1O88551 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.26■□□□□ 0.19
Cldn1O88551 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Cldn1O88551 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn1O88551 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.26■□□□□ 0.19
Cldn1O88551 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn1O88551 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn1O88551 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cldn1O88551 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn1O88551 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn1O88551 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn1O88551 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.25■□□□□ 0.19
Cldn1O88551 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn1O88551 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.25■□□□□ 0.19
Cldn1O88551 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn1O88551 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
Cldn1O88551 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn1O88551 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cldn1O88551 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn1O88551 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn1O88551 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn1O88551 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn1O88551 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn1O88551 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn1O88551 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.24■□□□□ 0.19
Cldn1O88551 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.24■□□□□ 0.19
Cldn1O88551 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.24■□□□□ 0.19
Cldn1O88551 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.24■□□□□ 0.19
Cldn1O88551 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cldn1O88551 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn1O88551 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn1O88551 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.24■□□□□ 0.19
Cldn1O88551 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn1O88551 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cldn1O88551 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn1O88551 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn1O88551 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.23■□□□□ 0.19
Cldn1O88551 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn1O88551 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.23■□□□□ 0.19
Cldn1O88551 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn1O88551 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cldn1O88551 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cldn1O88551 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cldn1O88551 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn1O88551 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn1O88551 Gm13836-201ENSMUST00000121159 501 ntBASIC16.22■□□□□ 0.19
Cldn1O88551 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn1O88551 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn1O88551 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn1O88551 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cldn1O88551 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.21■□□□□ 0.19
Cldn1O88551 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn1O88551 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn1O88551 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Cldn1O88551 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn1O88551 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cldn1O88551 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Cldn1O88551 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn1O88551 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.2■□□□□ 0.18
Cldn1O88551 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn1O88551 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn1O88551 Gm13534-201ENSMUST00000121169 513 ntBASIC16.2■□□□□ 0.18
Cldn1O88551 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.2■□□□□ 0.18
Cldn1O88551 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn1O88551 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn1O88551 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.2■□□□□ 0.18
Cldn1O88551 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn1O88551 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cldn1O88551 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cldn1O88551 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cldn1O88551 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms