Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Cacna1hO88427 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cacna1hO88427 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Cacna1hO88427 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cacna1hO88427 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cacna1hO88427 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cacna1hO88427 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cacna1hO88427 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cacna1hO88427 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Cacna1hO88427 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.72■□□□□ 0.59
Cacna1hO88427 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.72■□□□□ 0.59
Cacna1hO88427 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Cacna1hO88427 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Cacna1hO88427 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1hO88427 AA414768-201ENSMUST00000121924 1257 ntBASIC18.71■□□□□ 0.59
Cacna1hO88427 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1hO88427 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1hO88427 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1hO88427 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1hO88427 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1hO88427 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1hO88427 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1hO88427 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1hO88427 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.71■□□□□ 0.59
Cacna1hO88427 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.71■□□□□ 0.59
Cacna1hO88427 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1hO88427 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1hO88427 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1hO88427 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna1hO88427 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna1hO88427 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.7■□□□□ 0.58
Cacna1hO88427 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna1hO88427 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Cacna1hO88427 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Cacna1hO88427 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna1hO88427 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna1hO88427 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna1hO88427 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna1hO88427 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
Cacna1hO88427 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Cacna1hO88427 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1hO88427 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1hO88427 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1hO88427 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cacna1hO88427 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.69■□□□□ 0.58
Cacna1hO88427 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Cacna1hO88427 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1hO88427 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Cacna1hO88427 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1hO88427 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.69■□□□□ 0.58
Cacna1hO88427 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1hO88427 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1hO88427 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1hO88427 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna1hO88427 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1hO88427 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.68■□□□□ 0.58
Cacna1hO88427 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1hO88427 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1hO88427 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1hO88427 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1hO88427 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna1hO88427 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cacna1hO88427 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1hO88427 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1hO88427 Gm7860-201ENSMUST00000121190 879 ntBASIC18.67■□□□□ 0.58
Cacna1hO88427 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.67■□□□□ 0.58
Cacna1hO88427 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1hO88427 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1hO88427 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1hO88427 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna1hO88427 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Cacna1hO88427 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cacna1hO88427 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1hO88427 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1hO88427 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1hO88427 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1hO88427 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1hO88427 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Cacna1hO88427 Gm18032-201ENSMUST00000222541 538 ntBASIC18.66■□□□□ 0.58
Cacna1hO88427 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.66■□□□□ 0.58
Cacna1hO88427 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.66■□□□□ 0.58
Cacna1hO88427 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Cacna1hO88427 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1hO88427 Gm14859-201ENSMUST00000117752 357 ntBASIC18.66■□□□□ 0.58
Cacna1hO88427 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.66■□□□□ 0.58
Cacna1hO88427 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1hO88427 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1hO88427 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1hO88427 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1hO88427 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna1hO88427 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Cacna1hO88427 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1hO88427 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.65■□□□□ 0.58
Cacna1hO88427 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1hO88427 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1hO88427 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cacna1hO88427 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.65■□□□□ 0.58
Cacna1hO88427 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1hO88427 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna1hO88427 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms