Protein–RNA interactions for Protein: O70401

Tspan6, Tetraspanin-6, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6O70401 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tspan6O70401 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
Tspan6O70401 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tspan6O70401 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Tspan6O70401 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Tspan6O70401 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tspan6O70401 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Tspan6O70401 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tspan6O70401 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.62■□□□□ 0.57
Tspan6O70401 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tspan6O70401 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tspan6O70401 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tspan6O70401 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tspan6O70401 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tspan6O70401 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.62■□□□□ 0.57
Tspan6O70401 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tspan6O70401 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tspan6O70401 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Tspan6O70401 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tspan6O70401 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tspan6O70401 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Tspan6O70401 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Tspan6O70401 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tspan6O70401 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tspan6O70401 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Tspan6O70401 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Tspan6O70401 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tspan6O70401 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tspan6O70401 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Tspan6O70401 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tspan6O70401 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tspan6O70401 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tspan6O70401 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Tspan6O70401 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tspan6O70401 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tspan6O70401 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tspan6O70401 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tspan6O70401 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tspan6O70401 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tspan6O70401 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Tspan6O70401 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tspan6O70401 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tspan6O70401 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tspan6O70401 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tspan6O70401 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Tspan6O70401 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tspan6O70401 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tspan6O70401 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.6■□□□□ 0.57
Tspan6O70401 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tspan6O70401 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.6■□□□□ 0.57
Tspan6O70401 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tspan6O70401 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tspan6O70401 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tspan6O70401 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tspan6O70401 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tspan6O70401 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tspan6O70401 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tspan6O70401 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Tspan6O70401 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Tspan6O70401 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tspan6O70401 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.59■□□□□ 0.57
Tspan6O70401 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.59■□□□□ 0.57
Tspan6O70401 Gm20049-201ENSMUST00000219950 730 ntBASIC18.59■□□□□ 0.57
Tspan6O70401 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tspan6O70401 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tspan6O70401 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tspan6O70401 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.59■□□□□ 0.57
Tspan6O70401 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tspan6O70401 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tspan6O70401 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Tspan6O70401 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Tspan6O70401 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tspan6O70401 Gm8520-201ENSMUST00000186517 868 ntBASIC18.58■□□□□ 0.56
Tspan6O70401 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tspan6O70401 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tspan6O70401 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tspan6O70401 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tspan6O70401 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.57■□□□□ 0.56
Tspan6O70401 Gm26524-201ENSMUST00000192339 390 ntBASIC18.57■□□□□ 0.56
Tspan6O70401 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tspan6O70401 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tspan6O70401 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Tspan6O70401 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tspan6O70401 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tspan6O70401 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.56■□□□□ 0.56
Tspan6O70401 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tspan6O70401 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tspan6O70401 Gm22240-201ENSMUST00000175225 82 ntBASIC18.56■□□□□ 0.56
Tspan6O70401 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.56■□□□□ 0.56
Tspan6O70401 Rab3c-203ENSMUST00000224180 967 ntBASIC18.56■□□□□ 0.56
Tspan6O70401 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tspan6O70401 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.56■□□□□ 0.56
Tspan6O70401 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tspan6O70401 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tspan6O70401 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tspan6O70401 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tspan6O70401 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Tspan6O70401 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tspan6O70401 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tspan6O70401 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms