Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pde6dO55057 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.05■□□□□ -0
Pde6dO55057 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Pde6dO55057 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Pde6dO55057 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.04■□□□□ -0
Pde6dO55057 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pde6dO55057 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pde6dO55057 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pde6dO55057 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC15.04■□□□□ -0
Pde6dO55057 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Pde6dO55057 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Pde6dO55057 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pde6dO55057 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Pde6dO55057 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pde6dO55057 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pde6dO55057 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Pde6dO55057 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pde6dO55057 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pde6dO55057 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pde6dO55057 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC15.03■□□□□ -0
Pde6dO55057 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Pde6dO55057 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pde6dO55057 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.03■□□□□ -0
Pde6dO55057 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.03■□□□□ -0
Pde6dO55057 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pde6dO55057 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pde6dO55057 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pde6dO55057 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC15.03■□□□□ -0
Pde6dO55057 Gm7143-201ENSMUST00000222811 859 ntBASIC15.03■□□□□ -0
Pde6dO55057 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pde6dO55057 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC15.03■□□□□ -0
Pde6dO55057 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Pde6dO55057 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pde6dO55057 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pde6dO55057 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pde6dO55057 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pde6dO55057 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Pde6dO55057 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pde6dO55057 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pde6dO55057 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pde6dO55057 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pde6dO55057 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Pde6dO55057 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pde6dO55057 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pde6dO55057 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Pde6dO55057 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC15.02■□□□□ -0
Pde6dO55057 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC15.02■□□□□ -0
Pde6dO55057 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.02□□□□□ -0.01
Pde6dO55057 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Pde6dO55057 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Pde6dO55057 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pde6dO55057 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pde6dO55057 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Pde6dO55057 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.02□□□□□ -0.01
Pde6dO55057 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pde6dO55057 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pde6dO55057 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pde6dO55057 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pde6dO55057 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pde6dO55057 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.01□□□□□ -0.01
Pde6dO55057 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
Pde6dO55057 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pde6dO55057 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pde6dO55057 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pde6dO55057 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pde6dO55057 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pde6dO55057 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pde6dO55057 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Pde6dO55057 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.01□□□□□ -0.01
Pde6dO55057 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pde6dO55057 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pde6dO55057 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pde6dO55057 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pde6dO55057 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Pde6dO55057 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pde6dO55057 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pde6dO55057 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pde6dO55057 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pde6dO55057 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pde6dO55057 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Pde6dO55057 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Pde6dO55057 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15□□□□□ -0.01
Pde6dO55057 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pde6dO55057 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Pde6dO55057 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pde6dO55057 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC15□□□□□ -0.01
Pde6dO55057 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC15□□□□□ -0.01
Pde6dO55057 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pde6dO55057 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pde6dO55057 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15□□□□□ -0.01
Pde6dO55057 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Pde6dO55057 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pde6dO55057 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Pde6dO55057 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pde6dO55057 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pde6dO55057 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pde6dO55057 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pde6dO55057 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Pde6dO55057 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pde6dO55057 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms