Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.43■□□□□ 0.54
Cacna1bO55017 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cacna1bO55017 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cacna1bO55017 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cacna1bO55017 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cacna1bO55017 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cacna1bO55017 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cacna1bO55017 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.42■□□□□ 0.54
Cacna1bO55017 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cacna1bO55017 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cacna1bO55017 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cacna1bO55017 Mir1199-201ENSMUST00000117015 119 ntBASIC18.41■□□□□ 0.54
Cacna1bO55017 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cacna1bO55017 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cacna1bO55017 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cacna1bO55017 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cacna1bO55017 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cacna1bO55017 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cacna1bO55017 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.41■□□□□ 0.54
Cacna1bO55017 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.41■□□□□ 0.54
Cacna1bO55017 Gm9987-201ENSMUST00000069768 567 ntBASIC18.41■□□□□ 0.54
Cacna1bO55017 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cacna1bO55017 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cacna1bO55017 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cacna1bO55017 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cacna1bO55017 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cacna1bO55017 Gm15378-201ENSMUST00000121894 207 ntBASIC18.4■□□□□ 0.54
Cacna1bO55017 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cacna1bO55017 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cacna1bO55017 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cacna1bO55017 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cacna1bO55017 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.39■□□□□ 0.54
Cacna1bO55017 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cacna1bO55017 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.39■□□□□ 0.54
Cacna1bO55017 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cacna1bO55017 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cacna1bO55017 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cacna1bO55017 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Cacna1bO55017 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.39■□□□□ 0.53
Cacna1bO55017 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cacna1bO55017 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cacna1bO55017 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cacna1bO55017 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.39■□□□□ 0.53
Cacna1bO55017 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacna1bO55017 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cacna1bO55017 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cacna1bO55017 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cacna1bO55017 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Cacna1bO55017 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacna1bO55017 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacna1bO55017 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.38■□□□□ 0.53
Cacna1bO55017 Gm7860-201ENSMUST00000121190 879 ntBASIC18.38■□□□□ 0.53
Cacna1bO55017 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.38■□□□□ 0.53
Cacna1bO55017 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacna1bO55017 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cacna1bO55017 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacna1bO55017 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cacna1bO55017 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacna1bO55017 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cacna1bO55017 Mir5122-201ENSMUST00000175004 89 ntBASIC18.37■□□□□ 0.53
Cacna1bO55017 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Cacna1bO55017 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacna1bO55017 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacna1bO55017 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cacna1bO55017 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacna1bO55017 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cacna1bO55017 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacna1bO55017 Gm11249-201ENSMUST00000117071 859 ntBASIC18.37■□□□□ 0.53
Cacna1bO55017 Gm6433-201ENSMUST00000118634 875 ntBASIC18.37■□□□□ 0.53
Cacna1bO55017 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.37■□□□□ 0.53
Cacna1bO55017 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cacna1bO55017 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.37■□□□□ 0.53
Cacna1bO55017 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacna1bO55017 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cacna1bO55017 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cacna1bO55017 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.36■□□□□ 0.53
Cacna1bO55017 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cacna1bO55017 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Cacna1bO55017 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.36■□□□□ 0.53
Cacna1bO55017 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.36■□□□□ 0.53
Cacna1bO55017 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cacna1bO55017 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.36■□□□□ 0.53
Cacna1bO55017 Gm10698-201ENSMUST00000182663 604 ntBASIC18.35■□□□□ 0.53
Cacna1bO55017 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.35■□□□□ 0.53
Cacna1bO55017 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacna1bO55017 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacna1bO55017 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacna1bO55017 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Cacna1bO55017 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.35■□□□□ 0.53
Cacna1bO55017 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacna1bO55017 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacna1bO55017 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.34■□□□□ 0.53
Cacna1bO55017 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacna1bO55017 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.34■□□□□ 0.53
Cacna1bO55017 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacna1bO55017 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacna1bO55017 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cacna1bO55017 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacna1bO55017 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacna1bO55017 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms