Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Stx1aO35526 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Stx1aO35526 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Stx1aO35526 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.39■■□□□ 1.01
Stx1aO35526 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.39■■□□□ 1.01
Stx1aO35526 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.39■■□□□ 1.01
Stx1aO35526 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Stx1aO35526 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.39■■□□□ 1.01
Stx1aO35526 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Stx1aO35526 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Stx1aO35526 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Stx1aO35526 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
Stx1aO35526 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Stx1aO35526 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC21.39■■□□□ 1.01
Stx1aO35526 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.39■■□□□ 1.01
Stx1aO35526 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Stx1aO35526 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.38■■□□□ 1.01
Stx1aO35526 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.38■■□□□ 1.01
Stx1aO35526 Gm15546-201ENSMUST00000122095 826 ntBASIC21.38■■□□□ 1.01
Stx1aO35526 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Stx1aO35526 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Stx1aO35526 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Stx1aO35526 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Stx1aO35526 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Stx1aO35526 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Stx1aO35526 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Stx1aO35526 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Stx1aO35526 Gm5953-201ENSMUST00000220644 2616 ntBASIC21.37■■□□□ 1.01
Stx1aO35526 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Stx1aO35526 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Stx1aO35526 Gm9959-201ENSMUST00000068277 390 ntBASIC21.37■■□□□ 1.01
Stx1aO35526 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Stx1aO35526 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Stx1aO35526 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Stx1aO35526 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Stx1aO35526 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Stx1aO35526 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Stx1aO35526 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Stx1aO35526 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Stx1aO35526 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Stx1aO35526 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Stx1aO35526 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Stx1aO35526 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Stx1aO35526 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Stx1aO35526 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Stx1aO35526 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Stx1aO35526 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Stx1aO35526 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Stx1aO35526 Grk6-206ENSMUST00000224995 2971 ntBASIC21.35■■□□□ 1.01
Stx1aO35526 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Stx1aO35526 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Stx1aO35526 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Stx1aO35526 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Stx1aO35526 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Stx1aO35526 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
Stx1aO35526 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Stx1aO35526 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Stx1aO35526 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Stx1aO35526 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC21.34■■□□□ 1.01
Stx1aO35526 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.34■■□□□ 1.01
Stx1aO35526 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Stx1aO35526 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Stx1aO35526 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Stx1aO35526 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Stx1aO35526 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.34■■□□□ 1.01
Stx1aO35526 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Stx1aO35526 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Stx1aO35526 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Stx1aO35526 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.34■■□□□ 1.01
Stx1aO35526 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Stx1aO35526 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC21.34■■□□□ 1.01
Stx1aO35526 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Stx1aO35526 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Stx1aO35526 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Stx1aO35526 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.33■■□□□ 1.01
Stx1aO35526 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC21.33■■□□□ 1
Stx1aO35526 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC21.33■■□□□ 1
Stx1aO35526 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Stx1aO35526 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Stx1aO35526 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Stx1aO35526 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Stx1aO35526 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Stx1aO35526 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.32■■□□□ 1
Stx1aO35526 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Stx1aO35526 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC21.32■■□□□ 1
Stx1aO35526 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Stx1aO35526 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Stx1aO35526 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Stx1aO35526 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Stx1aO35526 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.32■■□□□ 1
Stx1aO35526 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.32■■□□□ 1
Stx1aO35526 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.32■■□□□ 1
Stx1aO35526 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.32■■□□□ 1
Stx1aO35526 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Stx1aO35526 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Stx1aO35526 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Stx1aO35526 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Stx1aO35526 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC21.31■■□□□ 1
Stx1aO35526 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.31■■□□□ 1
Stx1aO35526 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms