Protein–RNA interactions for Protein: O35452

Tnxb, Tenascin X, mousemouse

Predictions only

Length 4,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnxbO35452 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.11□□□□□ -0.15
TnxbO35452 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.11□□□□□ -0.15
TnxbO35452 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TnxbO35452 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TnxbO35452 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TnxbO35452 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TnxbO35452 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TnxbO35452 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TnxbO35452 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TnxbO35452 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TnxbO35452 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TnxbO35452 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TnxbO35452 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TnxbO35452 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TnxbO35452 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TnxbO35452 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TnxbO35452 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
TnxbO35452 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TnxbO35452 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TnxbO35452 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TnxbO35452 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TnxbO35452 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TnxbO35452 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TnxbO35452 Gm30025-201ENSMUST00000218555 728 ntBASIC14.09□□□□□ -0.15
TnxbO35452 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TnxbO35452 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TnxbO35452 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TnxbO35452 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
TnxbO35452 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TnxbO35452 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
TnxbO35452 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TnxbO35452 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TnxbO35452 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TnxbO35452 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
TnxbO35452 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TnxbO35452 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TnxbO35452 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TnxbO35452 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TnxbO35452 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
TnxbO35452 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TnxbO35452 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.07□□□□□ -0.16
TnxbO35452 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TnxbO35452 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TnxbO35452 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TnxbO35452 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TnxbO35452 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TnxbO35452 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TnxbO35452 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TnxbO35452 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TnxbO35452 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.07□□□□□ -0.16
TnxbO35452 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.07□□□□□ -0.16
TnxbO35452 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.07□□□□□ -0.16
TnxbO35452 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
TnxbO35452 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TnxbO35452 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TnxbO35452 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TnxbO35452 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TnxbO35452 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TnxbO35452 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TnxbO35452 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TnxbO35452 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TnxbO35452 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.06□□□□□ -0.16
TnxbO35452 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.06□□□□□ -0.16
TnxbO35452 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TnxbO35452 Mzt1-203ENSMUST00000227948 952 ntBASIC14.06□□□□□ -0.16
TnxbO35452 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TnxbO35452 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TnxbO35452 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TnxbO35452 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TnxbO35452 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TnxbO35452 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TnxbO35452 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TnxbO35452 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TnxbO35452 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TnxbO35452 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TnxbO35452 Gm13158-201ENSMUST00000122007 736 ntBASIC14.05□□□□□ -0.16
TnxbO35452 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TnxbO35452 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TnxbO35452 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TnxbO35452 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TnxbO35452 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TnxbO35452 Gm8587-201ENSMUST00000076538 843 ntBASIC14.04□□□□□ -0.16
TnxbO35452 Gm43909-201ENSMUST00000203443 1876 ntBASIC14.04□□□□□ -0.16
TnxbO35452 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TnxbO35452 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TnxbO35452 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TnxbO35452 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TnxbO35452 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TnxbO35452 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TnxbO35452 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.04□□□□□ -0.16
TnxbO35452 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TnxbO35452 Gm7860-201ENSMUST00000121190 879 ntBASIC14.03□□□□□ -0.16
TnxbO35452 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TnxbO35452 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TnxbO35452 H3f3aos-201ENSMUST00000097448 2905 ntBASIC14.03□□□□□ -0.16
TnxbO35452 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.03□□□□□ -0.16
TnxbO35452 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TnxbO35452 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.03□□□□□ -0.16
TnxbO35452 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.03□□□□□ -0.16
TnxbO35452 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms