Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trove2O08848 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trove2O08848 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.47■□□□□ 0.71
Trove2O08848 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
Trove2O08848 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trove2O08848 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.46■□□□□ 0.71
Trove2O08848 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trove2O08848 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trove2O08848 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trove2O08848 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trove2O08848 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trove2O08848 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trove2O08848 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trove2O08848 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trove2O08848 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trove2O08848 Rarb-207ENSMUST00000225921 2756 ntBASIC19.46■□□□□ 0.71
Trove2O08848 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.46■□□□□ 0.71
Trove2O08848 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trove2O08848 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trove2O08848 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Trove2O08848 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Trove2O08848 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trove2O08848 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trove2O08848 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trove2O08848 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.45■□□□□ 0.7
Trove2O08848 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trove2O08848 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trove2O08848 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trove2O08848 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trove2O08848 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trove2O08848 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Trove2O08848 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Trove2O08848 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trove2O08848 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trove2O08848 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trove2O08848 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Trove2O08848 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trove2O08848 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trove2O08848 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Trove2O08848 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.44■□□□□ 0.7
Trove2O08848 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trove2O08848 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.44■□□□□ 0.7
Trove2O08848 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.44■□□□□ 0.7
Trove2O08848 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trove2O08848 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Trove2O08848 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trove2O08848 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trove2O08848 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trove2O08848 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trove2O08848 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trove2O08848 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trove2O08848 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trove2O08848 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trove2O08848 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Trove2O08848 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.43■□□□□ 0.7
Trove2O08848 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trove2O08848 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trove2O08848 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Trove2O08848 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trove2O08848 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trove2O08848 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trove2O08848 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trove2O08848 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trove2O08848 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Trove2O08848 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Trove2O08848 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trove2O08848 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trove2O08848 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.42■□□□□ 0.7
Trove2O08848 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.42■□□□□ 0.7
Trove2O08848 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trove2O08848 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trove2O08848 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.41■□□□□ 0.7
Trove2O08848 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trove2O08848 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trove2O08848 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trove2O08848 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trove2O08848 Mir6236-201ENSMUST00000184437 123 ntBASIC19.41■□□□□ 0.7
Trove2O08848 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trove2O08848 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trove2O08848 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trove2O08848 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.41■□□□□ 0.7
Trove2O08848 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.41■□□□□ 0.7
Trove2O08848 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Trove2O08848 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trove2O08848 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trove2O08848 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trove2O08848 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trove2O08848 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trove2O08848 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trove2O08848 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trove2O08848 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trove2O08848 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trove2O08848 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trove2O08848 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trove2O08848 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.4■□□□□ 0.7
Trove2O08848 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trove2O08848 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trove2O08848 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trove2O08848 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trove2O08848 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms