Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ercc2O08811 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ercc2O08811 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ercc2O08811 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.51■□□□□ 0.71
Ercc2O08811 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ercc2O08811 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.5■□□□□ 0.71
Ercc2O08811 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Ercc2O08811 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ercc2O08811 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ercc2O08811 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.5■□□□□ 0.71
Ercc2O08811 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.5■□□□□ 0.71
Ercc2O08811 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ercc2O08811 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ercc2O08811 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ercc2O08811 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Ercc2O08811 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ercc2O08811 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ercc2O08811 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ercc2O08811 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.49■□□□□ 0.71
Ercc2O08811 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ercc2O08811 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.49■□□□□ 0.71
Ercc2O08811 Gm38205-201ENSMUST00000192243 258 ntBASIC19.49■□□□□ 0.71
Ercc2O08811 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ercc2O08811 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ercc2O08811 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ercc2O08811 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ercc2O08811 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Ercc2O08811 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.48■□□□□ 0.71
Ercc2O08811 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ercc2O08811 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ercc2O08811 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Ercc2O08811 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.48■□□□□ 0.71
Ercc2O08811 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.48■□□□□ 0.71
Ercc2O08811 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ercc2O08811 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ercc2O08811 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ercc2O08811 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ercc2O08811 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ercc2O08811 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Ercc2O08811 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc2O08811 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc2O08811 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc2O08811 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc2O08811 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc2O08811 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc2O08811 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc2O08811 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc2O08811 Gm10493-201ENSMUST00000097270 612 ntBASIC19.47■□□□□ 0.71
Ercc2O08811 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Ercc2O08811 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Ercc2O08811 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.47■□□□□ 0.71
Ercc2O08811 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc2O08811 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc2O08811 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc2O08811 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.47■□□□□ 0.71
Ercc2O08811 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.47■□□□□ 0.71
Ercc2O08811 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc2O08811 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ercc2O08811 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ercc2O08811 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.46■□□□□ 0.71
Ercc2O08811 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ercc2O08811 Reep4-203ENSMUST00000226563 1444 ntBASIC19.46■□□□□ 0.71
Ercc2O08811 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ercc2O08811 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.46■□□□□ 0.71
Ercc2O08811 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ercc2O08811 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ercc2O08811 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ercc2O08811 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ercc2O08811 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ercc2O08811 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ercc2O08811 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ercc2O08811 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ercc2O08811 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ercc2O08811 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ercc2O08811 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ercc2O08811 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ercc2O08811 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ercc2O08811 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ercc2O08811 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc2O08811 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc2O08811 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Ercc2O08811 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
Ercc2O08811 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc2O08811 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ercc2O08811 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc2O08811 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ercc2O08811 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc2O08811 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.44■□□□□ 0.7
Ercc2O08811 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.44■□□□□ 0.7
Ercc2O08811 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Ercc2O08811 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc2O08811 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc2O08811 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc2O08811 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ercc2O08811 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ercc2O08811 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ercc2O08811 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Ercc2O08811 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ercc2O08811 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ercc2O08811 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms