Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfrsf11bO08712 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfrsf11bO08712 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfrsf11bO08712 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfrsf11bO08712 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfrsf11bO08712 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfrsf11bO08712 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfrsf11bO08712 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfrsf11bO08712 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfrsf11bO08712 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnfrsf11bO08712 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Tnfrsf11bO08712 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tnfrsf11bO08712 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tnfrsf11bO08712 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.33■□□□□ 0.69
Tnfrsf11bO08712 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.33■□□□□ 0.69
Tnfrsf11bO08712 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tnfrsf11bO08712 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.33■□□□□ 0.68
Tnfrsf11bO08712 Mir7075-201ENSMUST00000184187 82 ntBASIC19.33■□□□□ 0.68
Tnfrsf11bO08712 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.33■□□□□ 0.68
Tnfrsf11bO08712 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.33■□□□□ 0.68
Tnfrsf11bO08712 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tnfrsf11bO08712 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tnfrsf11bO08712 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tnfrsf11bO08712 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Tnfrsf11bO08712 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tnfrsf11bO08712 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Tnfrsf11bO08712 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Tnfrsf11bO08712 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfrsf11bO08712 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Tnfrsf11bO08712 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfrsf11bO08712 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.32■□□□□ 0.68
Tnfrsf11bO08712 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfrsf11bO08712 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfrsf11bO08712 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfrsf11bO08712 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfrsf11bO08712 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tnfrsf11bO08712 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.31■□□□□ 0.68
Tnfrsf11bO08712 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfrsf11bO08712 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfrsf11bO08712 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfrsf11bO08712 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfrsf11bO08712 Smad6-203ENSMUST00000179458 273 ntBASIC19.31■□□□□ 0.68
Tnfrsf11bO08712 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.31■□□□□ 0.68
Tnfrsf11bO08712 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.31■□□□□ 0.68
Tnfrsf11bO08712 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfrsf11bO08712 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Tnfrsf11bO08712 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfrsf11bO08712 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfrsf11bO08712 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Tnfrsf11bO08712 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Tnfrsf11bO08712 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfrsf11bO08712 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnfrsf11bO08712 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf11bO08712 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.3■□□□□ 0.68
Tnfrsf11bO08712 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Tnfrsf11bO08712 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf11bO08712 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Tnfrsf11bO08712 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf11bO08712 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf11bO08712 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf11bO08712 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.3■□□□□ 0.68
Tnfrsf11bO08712 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.3■□□□□ 0.68
Tnfrsf11bO08712 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnfrsf11bO08712 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Tnfrsf11bO08712 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfrsf11bO08712 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Tnfrsf11bO08712 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfrsf11bO08712 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Tnfrsf11bO08712 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfrsf11bO08712 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfrsf11bO08712 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfrsf11bO08712 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Tnfrsf11bO08712 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfrsf11bO08712 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfrsf11bO08712 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfrsf11bO08712 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tnfrsf11bO08712 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf11bO08712 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Tnfrsf11bO08712 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf11bO08712 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf11bO08712 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf11bO08712 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf11bO08712 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Tnfrsf11bO08712 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf11bO08712 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Tnfrsf11bO08712 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf11bO08712 Gm11421-201ENSMUST00000122124 294 ntBASIC19.28■□□□□ 0.68
Tnfrsf11bO08712 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf11bO08712 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf11bO08712 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf11bO08712 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf11bO08712 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tnfrsf11bO08712 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Tnfrsf11bO08712 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfrsf11bO08712 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfrsf11bO08712 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tnfrsf11bO08712 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.27■□□□□ 0.68
Tnfrsf11bO08712 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Tnfrsf11bO08712 Gm8493-201ENSMUST00000196881 489 ntBASIC19.27■□□□□ 0.68
Tnfrsf11bO08712 Gm43173-201ENSMUST00000202246 593 ntBASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms