Protein–RNA interactions for Protein: J3QMS8

Gm3415, Predicted gene 3415, mousemouse

Predictions only

Length 315 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3415J3QMS8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Gm3415J3QMS8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm3415J3QMS8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm3415J3QMS8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Gm3415J3QMS8 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.25■□□□□ 0.83
Gm3415J3QMS8 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.25■□□□□ 0.83
Gm3415J3QMS8 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.25■□□□□ 0.83
Gm3415J3QMS8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm3415J3QMS8 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.25■□□□□ 0.83
Gm3415J3QMS8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm3415J3QMS8 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm3415J3QMS8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm3415J3QMS8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.25■□□□□ 0.83
Gm3415J3QMS8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Gm3415J3QMS8 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.25■□□□□ 0.83
Gm3415J3QMS8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm3415J3QMS8 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm3415J3QMS8 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.24■□□□□ 0.83
Gm3415J3QMS8 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Gm3415J3QMS8 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm3415J3QMS8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.24■□□□□ 0.83
Gm3415J3QMS8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.24■□□□□ 0.83
Gm3415J3QMS8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm3415J3QMS8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm3415J3QMS8 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm3415J3QMS8 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.23■□□□□ 0.83
Gm3415J3QMS8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm3415J3QMS8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm3415J3QMS8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm3415J3QMS8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm3415J3QMS8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm3415J3QMS8 Gm18284-201ENSMUST00000172604 624 ntBASIC20.23■□□□□ 0.83
Gm3415J3QMS8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Gm3415J3QMS8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm3415J3QMS8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm3415J3QMS8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm3415J3QMS8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Gm3415J3QMS8 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Gm3415J3QMS8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Gm3415J3QMS8 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Gm3415J3QMS8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gm3415J3QMS8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm3415J3QMS8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gm3415J3QMS8 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.22■□□□□ 0.83
Gm3415J3QMS8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
Gm3415J3QMS8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Gm3415J3QMS8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm3415J3QMS8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm3415J3QMS8 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm3415J3QMS8 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.22■□□□□ 0.83
Gm3415J3QMS8 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Gm3415J3QMS8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3415J3QMS8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3415J3QMS8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3415J3QMS8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3415J3QMS8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3415J3QMS8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3415J3QMS8 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.21■□□□□ 0.83
Gm3415J3QMS8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3415J3QMS8 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3415J3QMS8 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3415J3QMS8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm3415J3QMS8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
Gm3415J3QMS8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3415J3QMS8 Reep4-203ENSMUST00000226563 1444 ntBASIC20.2■□□□□ 0.82
Gm3415J3QMS8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3415J3QMS8 Gm42778-201ENSMUST00000199644 553 ntBASIC20.2■□□□□ 0.82
Gm3415J3QMS8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3415J3QMS8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3415J3QMS8 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3415J3QMS8 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3415J3QMS8 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.2■□□□□ 0.82
Gm3415J3QMS8 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm3415J3QMS8 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Gm3415J3QMS8 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3415J3QMS8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.19■□□□□ 0.82
Gm3415J3QMS8 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.19■□□□□ 0.82
Gm3415J3QMS8 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3415J3QMS8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3415J3QMS8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3415J3QMS8 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3415J3QMS8 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3415J3QMS8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.19■□□□□ 0.82
Gm3415J3QMS8 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3415J3QMS8 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.19■□□□□ 0.82
Gm3415J3QMS8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Gm3415J3QMS8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3415J3QMS8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.19■□□□□ 0.82
Gm3415J3QMS8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm3415J3QMS8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Gm3415J3QMS8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm3415J3QMS8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Gm3415J3QMS8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Gm3415J3QMS8 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm3415J3QMS8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.18■□□□□ 0.82
Gm3415J3QMS8 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.18■□□□□ 0.82
Gm3415J3QMS8 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.18■□□□□ 0.82
Gm3415J3QMS8 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Gm3415J3QMS8 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.18■□□□□ 0.82
Gm3415J3QMS8 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms