Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC23.05■■□□□ 1.28
Ube4aE9Q735 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ube4aE9Q735 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ube4aE9Q735 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ube4aE9Q735 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
Ube4aE9Q735 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ube4aE9Q735 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ube4aE9Q735 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC23.04■■□□□ 1.28
Ube4aE9Q735 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ube4aE9Q735 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ube4aE9Q735 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ube4aE9Q735 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC23.04■■□□□ 1.28
Ube4aE9Q735 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ube4aE9Q735 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ube4aE9Q735 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ube4aE9Q735 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ube4aE9Q735 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC23.04■■□□□ 1.28
Ube4aE9Q735 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC23.03■■□□□ 1.28
Ube4aE9Q735 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ube4aE9Q735 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ube4aE9Q735 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC23.03■■□□□ 1.28
Ube4aE9Q735 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ube4aE9Q735 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ube4aE9Q735 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ube4aE9Q735 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC23.03■■□□□ 1.28
Ube4aE9Q735 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ube4aE9Q735 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ube4aE9Q735 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ube4aE9Q735 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ube4aE9Q735 Gm45640-201ENSMUST00000210665 1896 ntBASIC23.02■■□□□ 1.28
Ube4aE9Q735 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ube4aE9Q735 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ube4aE9Q735 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Ube4aE9Q735 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC23.02■■□□□ 1.28
Ube4aE9Q735 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Ube4aE9Q735 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC23.02■■□□□ 1.28
Ube4aE9Q735 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ube4aE9Q735 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ube4aE9Q735 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Ube4aE9Q735 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ube4aE9Q735 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Ube4aE9Q735 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ube4aE9Q735 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Ube4aE9Q735 Gm13168-201ENSMUST00000121771 632 ntBASIC23.01■■□□□ 1.27
Ube4aE9Q735 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ube4aE9Q735 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Ube4aE9Q735 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ube4aE9Q735 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ube4aE9Q735 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Ube4aE9Q735 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC23■■□□□ 1.27
Ube4aE9Q735 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Ube4aE9Q735 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC23■■□□□ 1.27
Ube4aE9Q735 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ube4aE9Q735 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ube4aE9Q735 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
Ube4aE9Q735 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ube4aE9Q735 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Ube4aE9Q735 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ube4aE9Q735 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ube4aE9Q735 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Ube4aE9Q735 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Ube4aE9Q735 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Ube4aE9Q735 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Ube4aE9Q735 Trmt13-210ENSMUST00000198454 880 ntBASIC22.99■■□□□ 1.27
Ube4aE9Q735 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ube4aE9Q735 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ube4aE9Q735 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Ube4aE9Q735 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Ube4aE9Q735 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Ube4aE9Q735 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ube4aE9Q735 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC22.99■■□□□ 1.27
Ube4aE9Q735 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
Ube4aE9Q735 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC22.99■■□□□ 1.27
Ube4aE9Q735 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Ube4aE9Q735 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Ube4aE9Q735 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ube4aE9Q735 Gm44878-201ENSMUST00000205812 1295 ntBASIC22.98■■□□□ 1.27
Ube4aE9Q735 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC22.98■■□□□ 1.27
Ube4aE9Q735 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Ube4aE9Q735 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Ube4aE9Q735 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ube4aE9Q735 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ube4aE9Q735 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ube4aE9Q735 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Ube4aE9Q735 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Ube4aE9Q735 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ube4aE9Q735 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Ube4aE9Q735 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ube4aE9Q735 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Ube4aE9Q735 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Ube4aE9Q735 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ube4aE9Q735 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ube4aE9Q735 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ube4aE9Q735 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Ube4aE9Q735 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ube4aE9Q735 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC22.96■■□□□ 1.27
Ube4aE9Q735 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC22.96■■□□□ 1.27
Ube4aE9Q735 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Ube4aE9Q735 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Ube4aE9Q735 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms