Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf4lE9Q2N0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf4lE9Q2N0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Cpsf4lE9Q2N0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf4lE9Q2N0 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Cpsf4lE9Q2N0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Cpsf4lE9Q2N0 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf4lE9Q2N0 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf4lE9Q2N0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Cpsf4lE9Q2N0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf4lE9Q2N0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.14■□□□□ 0.17
Cpsf4lE9Q2N0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf4lE9Q2N0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Cpsf4lE9Q2N0 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
Cpsf4lE9Q2N0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf4lE9Q2N0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.14■□□□□ 0.17
Cpsf4lE9Q2N0 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf4lE9Q2N0 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cpsf4lE9Q2N0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Cpsf4lE9Q2N0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf4lE9Q2N0 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Cpsf4lE9Q2N0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf4lE9Q2N0 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf4lE9Q2N0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf4lE9Q2N0 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf4lE9Q2N0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Cpsf4lE9Q2N0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf4lE9Q2N0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.13■□□□□ 0.17
Cpsf4lE9Q2N0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf4lE9Q2N0 Iqck-206ENSMUST00000208658 2891 ntBASIC16.13■□□□□ 0.17
Cpsf4lE9Q2N0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Cpsf4lE9Q2N0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf4lE9Q2N0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf4lE9Q2N0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
Cpsf4lE9Q2N0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.13■□□□□ 0.17
Cpsf4lE9Q2N0 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.13■□□□□ 0.17
Cpsf4lE9Q2N0 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.13■□□□□ 0.17
Cpsf4lE9Q2N0 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.13■□□□□ 0.17
Cpsf4lE9Q2N0 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.13■□□□□ 0.17
Cpsf4lE9Q2N0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf4lE9Q2N0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf4lE9Q2N0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf4lE9Q2N0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.13■□□□□ 0.17
Cpsf4lE9Q2N0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf4lE9Q2N0 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Cpsf4lE9Q2N0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cpsf4lE9Q2N0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf4lE9Q2N0 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.12■□□□□ 0.17
Cpsf4lE9Q2N0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Cpsf4lE9Q2N0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf4lE9Q2N0 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.12■□□□□ 0.17
Cpsf4lE9Q2N0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cpsf4lE9Q2N0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cpsf4lE9Q2N0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf4lE9Q2N0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf4lE9Q2N0 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf4lE9Q2N0 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf4lE9Q2N0 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf4lE9Q2N0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf4lE9Q2N0 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf4lE9Q2N0 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf4lE9Q2N0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf4lE9Q2N0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf4lE9Q2N0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cpsf4lE9Q2N0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Cpsf4lE9Q2N0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Cpsf4lE9Q2N0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf4lE9Q2N0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf4lE9Q2N0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf4lE9Q2N0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf4lE9Q2N0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Cpsf4lE9Q2N0 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.11■□□□□ 0.17
Cpsf4lE9Q2N0 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf4lE9Q2N0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf4lE9Q2N0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf4lE9Q2N0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cpsf4lE9Q2N0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf4lE9Q2N0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf4lE9Q2N0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf4lE9Q2N0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf4lE9Q2N0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf4lE9Q2N0 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Cpsf4lE9Q2N0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf4lE9Q2N0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf4lE9Q2N0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf4lE9Q2N0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf4lE9Q2N0 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf4lE9Q2N0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cpsf4lE9Q2N0 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf4lE9Q2N0 Gm13234-201ENSMUST00000120010 747 ntBASIC16.09■□□□□ 0.17
Cpsf4lE9Q2N0 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.09■□□□□ 0.17
Cpsf4lE9Q2N0 Gm18284-201ENSMUST00000172604 624 ntBASIC16.09■□□□□ 0.17
Cpsf4lE9Q2N0 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.09■□□□□ 0.17
Cpsf4lE9Q2N0 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf4lE9Q2N0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.09■□□□□ 0.17
Cpsf4lE9Q2N0 Gm5874-201ENSMUST00000096101 508 ntBASIC16.09■□□□□ 0.17
Cpsf4lE9Q2N0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf4lE9Q2N0 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf4lE9Q2N0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cpsf4lE9Q2N0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms