Protein–RNA interactions for Protein: E9PY62

Cntnap3, Contactin-associated protein-like 3, mousemouse

Predictions only

Length 1,287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap3E9PY62 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Cntnap3E9PY62 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC21.07■□□□□ 0.96
Cntnap3E9PY62 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cntnap3E9PY62 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cntnap3E9PY62 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Cntnap3E9PY62 Gm2399-201ENSMUST00000104944 225 ntBASIC21.07■□□□□ 0.96
Cntnap3E9PY62 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC21.07■□□□□ 0.96
Cntnap3E9PY62 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cntnap3E9PY62 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC21.07■□□□□ 0.96
Cntnap3E9PY62 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cntnap3E9PY62 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Cntnap3E9PY62 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cntnap3E9PY62 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cntnap3E9PY62 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cntnap3E9PY62 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cntnap3E9PY62 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC21.06■□□□□ 0.96
Cntnap3E9PY62 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.06■□□□□ 0.96
Cntnap3E9PY62 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cntnap3E9PY62 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cntnap3E9PY62 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cntnap3E9PY62 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cntnap3E9PY62 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC21.05■□□□□ 0.96
Cntnap3E9PY62 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC21.05■□□□□ 0.96
Cntnap3E9PY62 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC21.05■□□□□ 0.96
Cntnap3E9PY62 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cntnap3E9PY62 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Cntnap3E9PY62 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Cntnap3E9PY62 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cntnap3E9PY62 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.05■□□□□ 0.96
Cntnap3E9PY62 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cntnap3E9PY62 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cntnap3E9PY62 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cntnap3E9PY62 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cntnap3E9PY62 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cntnap3E9PY62 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cntnap3E9PY62 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cntnap3E9PY62 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
Cntnap3E9PY62 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.04■□□□□ 0.96
Cntnap3E9PY62 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
Cntnap3E9PY62 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cntnap3E9PY62 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Cntnap3E9PY62 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.04■□□□□ 0.96
Cntnap3E9PY62 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cntnap3E9PY62 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cntnap3E9PY62 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Cntnap3E9PY62 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cntnap3E9PY62 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Cntnap3E9PY62 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.03■□□□□ 0.96
Cntnap3E9PY62 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Cntnap3E9PY62 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cntnap3E9PY62 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cntnap3E9PY62 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cntnap3E9PY62 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Cntnap3E9PY62 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cntnap3E9PY62 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Cntnap3E9PY62 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cntnap3E9PY62 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Cntnap3E9PY62 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cntnap3E9PY62 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
Cntnap3E9PY62 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cntnap3E9PY62 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cntnap3E9PY62 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cntnap3E9PY62 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cntnap3E9PY62 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cntnap3E9PY62 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cntnap3E9PY62 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cntnap3E9PY62 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cntnap3E9PY62 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC21.01■□□□□ 0.95
Cntnap3E9PY62 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
Cntnap3E9PY62 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cntnap3E9PY62 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cntnap3E9PY62 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cntnap3E9PY62 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cntnap3E9PY62 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cntnap3E9PY62 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cntnap3E9PY62 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cntnap3E9PY62 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cntnap3E9PY62 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
Cntnap3E9PY62 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Cntnap3E9PY62 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cntnap3E9PY62 Gm30025-201ENSMUST00000218555 728 ntBASIC21■□□□□ 0.95
Cntnap3E9PY62 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cntnap3E9PY62 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cntnap3E9PY62 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
Cntnap3E9PY62 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Cntnap3E9PY62 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cntnap3E9PY62 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cntnap3E9PY62 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cntnap3E9PY62 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cntnap3E9PY62 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Cntnap3E9PY62 Gm9103-201ENSMUST00000119371 405 ntBASIC20.99■□□□□ 0.95
Cntnap3E9PY62 Gm13158-201ENSMUST00000122007 736 ntBASIC20.99■□□□□ 0.95
Cntnap3E9PY62 Gm44549-201ENSMUST00000208351 577 ntBASIC20.99■□□□□ 0.95
Cntnap3E9PY62 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cntnap3E9PY62 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cntnap3E9PY62 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20.99■□□□□ 0.95
Cntnap3E9PY62 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cntnap3E9PY62 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.99■□□□□ 0.95
Cntnap3E9PY62 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cntnap3E9PY62 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms