Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh17E9PXF0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh17E9PXF0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh17E9PXF0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh17E9PXF0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh17E9PXF0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh17E9PXF0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh17E9PXF0 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.67■□□□□ 0.42
Pcdh17E9PXF0 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh17E9PXF0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.67■□□□□ 0.42
Pcdh17E9PXF0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh17E9PXF0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pcdh17E9PXF0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh17E9PXF0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh17E9PXF0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh17E9PXF0 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Pcdh17E9PXF0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh17E9PXF0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Pcdh17E9PXF0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh17E9PXF0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh17E9PXF0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Pcdh17E9PXF0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Pcdh17E9PXF0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.66■□□□□ 0.42
Pcdh17E9PXF0 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh17E9PXF0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh17E9PXF0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh17E9PXF0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh17E9PXF0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh17E9PXF0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh17E9PXF0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdh17E9PXF0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdh17E9PXF0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh17E9PXF0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh17E9PXF0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.65■□□□□ 0.42
Pcdh17E9PXF0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh17E9PXF0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Pcdh17E9PXF0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh17E9PXF0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh17E9PXF0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdh17E9PXF0 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdh17E9PXF0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdh17E9PXF0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh17E9PXF0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh17E9PXF0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh17E9PXF0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh17E9PXF0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.64■□□□□ 0.41
Pcdh17E9PXF0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh17E9PXF0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.64■□□□□ 0.41
Pcdh17E9PXF0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh17E9PXF0 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh17E9PXF0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Pcdh17E9PXF0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh17E9PXF0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh17E9PXF0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh17E9PXF0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcdh17E9PXF0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdh17E9PXF0 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcdh17E9PXF0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh17E9PXF0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh17E9PXF0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh17E9PXF0 Gm13534-201ENSMUST00000121169 513 ntBASIC17.63■□□□□ 0.41
Pcdh17E9PXF0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.63■□□□□ 0.41
Pcdh17E9PXF0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh17E9PXF0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Pcdh17E9PXF0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Pcdh17E9PXF0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh17E9PXF0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Pcdh17E9PXF0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh17E9PXF0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdh17E9PXF0 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh17E9PXF0 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh17E9PXF0 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh17E9PXF0 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.62■□□□□ 0.41
Pcdh17E9PXF0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.62■□□□□ 0.41
Pcdh17E9PXF0 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh17E9PXF0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh17E9PXF0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh17E9PXF0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh17E9PXF0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdh17E9PXF0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh17E9PXF0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.61■□□□□ 0.41
Pcdh17E9PXF0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pcdh17E9PXF0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.61■□□□□ 0.41
Pcdh17E9PXF0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh17E9PXF0 Gm12441-201ENSMUST00000121806 588 ntBASIC17.61■□□□□ 0.41
Pcdh17E9PXF0 Gm6420-201ENSMUST00000193885 723 ntBASIC17.61■□□□□ 0.41
Pcdh17E9PXF0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh17E9PXF0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Pcdh17E9PXF0 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh17E9PXF0 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.61■□□□□ 0.41
Pcdh17E9PXF0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdh17E9PXF0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Pcdh17E9PXF0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Pcdh17E9PXF0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdh17E9PXF0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.6■□□□□ 0.41
Pcdh17E9PXF0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.6■□□□□ 0.41
Pcdh17E9PXF0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.6■□□□□ 0.41
Pcdh17E9PXF0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Pcdh17E9PXF0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Pcdh17E9PXF0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms