Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC27.13■■□□□ 1.93
Hfm1D3Z4R1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC27.13■■□□□ 1.93
Hfm1D3Z4R1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Hfm1D3Z4R1 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Hfm1D3Z4R1 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Hfm1D3Z4R1 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
Hfm1D3Z4R1 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Hfm1D3Z4R1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Hfm1D3Z4R1 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Hfm1D3Z4R1 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Hfm1D3Z4R1 CT010444.2-201ENSMUST00000217877 1629 ntBASIC27.12■■□□□ 1.93
Hfm1D3Z4R1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Hfm1D3Z4R1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Hfm1D3Z4R1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Hfm1D3Z4R1 Gm13158-201ENSMUST00000122007 736 ntBASIC27.11■■□□□ 1.93
Hfm1D3Z4R1 Mir5122-201ENSMUST00000175004 89 ntBASIC27.11■■□□□ 1.93
Hfm1D3Z4R1 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Hfm1D3Z4R1 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Hfm1D3Z4R1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Hfm1D3Z4R1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Hfm1D3Z4R1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
Hfm1D3Z4R1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Hfm1D3Z4R1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Hfm1D3Z4R1 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC27.1■■□□□ 1.93
Hfm1D3Z4R1 H2-K2-201ENSMUST00000174250 1049 ntBASIC27.1■■□□□ 1.93
Hfm1D3Z4R1 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC27.1■■□□□ 1.93
Hfm1D3Z4R1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
Hfm1D3Z4R1 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
Hfm1D3Z4R1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
Hfm1D3Z4R1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Hfm1D3Z4R1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Hfm1D3Z4R1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
Hfm1D3Z4R1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Hfm1D3Z4R1 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Hfm1D3Z4R1 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Hfm1D3Z4R1 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC27.09■■□□□ 1.93
Hfm1D3Z4R1 AC121577.1-201ENSMUST00000227302 707 ntBASIC27.09■■□□□ 1.93
Hfm1D3Z4R1 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC27.09■■□□□ 1.93
Hfm1D3Z4R1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC27.09■■□□□ 1.93
Hfm1D3Z4R1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Hfm1D3Z4R1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Hfm1D3Z4R1 Gm10167-201ENSMUST00000150411 1479 ntBASIC27.09■■□□□ 1.93
Hfm1D3Z4R1 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC27.08■■□□□ 1.93
Hfm1D3Z4R1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC27.08■■□□□ 1.93
Hfm1D3Z4R1 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Hfm1D3Z4R1 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Hfm1D3Z4R1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
Hfm1D3Z4R1 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC27.08■■□□□ 1.93
Hfm1D3Z4R1 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Hfm1D3Z4R1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Hfm1D3Z4R1 Gm32699-201ENSMUST00000221728 1988 ntBASIC27.08■■□□□ 1.93
Hfm1D3Z4R1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Hfm1D3Z4R1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Hfm1D3Z4R1 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Hfm1D3Z4R1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Hfm1D3Z4R1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Hfm1D3Z4R1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Hfm1D3Z4R1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Hfm1D3Z4R1 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Hfm1D3Z4R1 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Hfm1D3Z4R1 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Hfm1D3Z4R1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Hfm1D3Z4R1 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC27.06■■□□□ 1.92
Hfm1D3Z4R1 Gm15847-201ENSMUST00000121417 1065 ntBASIC27.06■■□□□ 1.92
Hfm1D3Z4R1 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC27.06■■□□□ 1.92
Hfm1D3Z4R1 AC153881.2-201ENSMUST00000214877 204 ntBASIC27.06■■□□□ 1.92
Hfm1D3Z4R1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Hfm1D3Z4R1 Gm9987-201ENSMUST00000069768 567 ntBASIC27.06■■□□□ 1.92
Hfm1D3Z4R1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC27.06■■□□□ 1.92
Hfm1D3Z4R1 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Hfm1D3Z4R1 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Hfm1D3Z4R1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Hfm1D3Z4R1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Hfm1D3Z4R1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
Hfm1D3Z4R1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Hfm1D3Z4R1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Hfm1D3Z4R1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC27.05■■□□□ 1.92
Hfm1D3Z4R1 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
Hfm1D3Z4R1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Hfm1D3Z4R1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
Hfm1D3Z4R1 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Hfm1D3Z4R1 Gm12504-201ENSMUST00000120860 2231 ntBASIC27.04■■□□□ 1.92
Hfm1D3Z4R1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC27.04■■□□□ 1.92
Hfm1D3Z4R1 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Hfm1D3Z4R1 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
Hfm1D3Z4R1 Gm20472-201ENSMUST00000174403 1240 ntBASIC27.04■■□□□ 1.92
Hfm1D3Z4R1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC27.04■■□□□ 1.92
Hfm1D3Z4R1 AC140264.2-202ENSMUST00000218746 817 ntBASIC27.04■■□□□ 1.92
Hfm1D3Z4R1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC27.04■■□□□ 1.92
Hfm1D3Z4R1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Hfm1D3Z4R1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Hfm1D3Z4R1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC27.04■■□□□ 1.92
Hfm1D3Z4R1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Hfm1D3Z4R1 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
Hfm1D3Z4R1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC27.03■■□□□ 1.92
Hfm1D3Z4R1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Hfm1D3Z4R1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Hfm1D3Z4R1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC27.03■■□□□ 1.92
Hfm1D3Z4R1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Hfm1D3Z4R1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms