Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ptchd4B9EKX1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ptchd4B9EKX1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Ptchd4B9EKX1 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.57■□□□□ 0.88
Ptchd4B9EKX1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ptchd4B9EKX1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ptchd4B9EKX1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ptchd4B9EKX1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.56■□□□□ 0.88
Ptchd4B9EKX1 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC20.56■□□□□ 0.88
Ptchd4B9EKX1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ptchd4B9EKX1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.56■□□□□ 0.88
Ptchd4B9EKX1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ptchd4B9EKX1 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ptchd4B9EKX1 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.56■□□□□ 0.88
Ptchd4B9EKX1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
Ptchd4B9EKX1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.56■□□□□ 0.88
Ptchd4B9EKX1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ptchd4B9EKX1 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Ptchd4B9EKX1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ptchd4B9EKX1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Ptchd4B9EKX1 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ptchd4B9EKX1 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.55■□□□□ 0.88
Ptchd4B9EKX1 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ptchd4B9EKX1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ptchd4B9EKX1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ptchd4B9EKX1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.55■□□□□ 0.88
Ptchd4B9EKX1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ptchd4B9EKX1 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ptchd4B9EKX1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ptchd4B9EKX1 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.55■□□□□ 0.88
Ptchd4B9EKX1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptchd4B9EKX1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.54■□□□□ 0.88
Ptchd4B9EKX1 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptchd4B9EKX1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.54■□□□□ 0.88
Ptchd4B9EKX1 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.54■□□□□ 0.88
Ptchd4B9EKX1 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ptchd4B9EKX1 Rab3c-203ENSMUST00000224180 967 ntBASIC20.54■□□□□ 0.88
Ptchd4B9EKX1 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptchd4B9EKX1 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptchd4B9EKX1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptchd4B9EKX1 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ptchd4B9EKX1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptchd4B9EKX1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ptchd4B9EKX1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ptchd4B9EKX1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Ptchd4B9EKX1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Ptchd4B9EKX1 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ptchd4B9EKX1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.53■□□□□ 0.88
Ptchd4B9EKX1 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ptchd4B9EKX1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ptchd4B9EKX1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ptchd4B9EKX1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ptchd4B9EKX1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Ptchd4B9EKX1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.53■□□□□ 0.88
Ptchd4B9EKX1 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ptchd4B9EKX1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ptchd4B9EKX1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ptchd4B9EKX1 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ptchd4B9EKX1 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ptchd4B9EKX1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.52■□□□□ 0.88
Ptchd4B9EKX1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ptchd4B9EKX1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ptchd4B9EKX1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ptchd4B9EKX1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ptchd4B9EKX1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Ptchd4B9EKX1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ptchd4B9EKX1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ptchd4B9EKX1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ptchd4B9EKX1 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Ptchd4B9EKX1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.51■□□□□ 0.87
Ptchd4B9EKX1 Gm22240-201ENSMUST00000175225 82 ntBASIC20.51■□□□□ 0.87
Ptchd4B9EKX1 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.51■□□□□ 0.87
Ptchd4B9EKX1 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ptchd4B9EKX1 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.51■□□□□ 0.87
Ptchd4B9EKX1 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.51■□□□□ 0.87
Ptchd4B9EKX1 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ptchd4B9EKX1 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.51■□□□□ 0.87
Ptchd4B9EKX1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ptchd4B9EKX1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Ptchd4B9EKX1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ptchd4B9EKX1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.5■□□□□ 0.87
Ptchd4B9EKX1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptchd4B9EKX1 Gm8520-201ENSMUST00000186517 868 ntBASIC20.5■□□□□ 0.87
Ptchd4B9EKX1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.5■□□□□ 0.87
Ptchd4B9EKX1 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Ptchd4B9EKX1 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Ptchd4B9EKX1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptchd4B9EKX1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptchd4B9EKX1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptchd4B9EKX1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptchd4B9EKX1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptchd4B9EKX1 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ptchd4B9EKX1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ptchd4B9EKX1 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ptchd4B9EKX1 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ptchd4B9EKX1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ptchd4B9EKX1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20.49■□□□□ 0.87
Ptchd4B9EKX1 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ptchd4B9EKX1 Gm37856-201ENSMUST00000191634 999 ntBASIC20.49■□□□□ 0.87
Ptchd4B9EKX1 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms