Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Gm12887B1AVM1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm12887B1AVM1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm12887B1AVM1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm12887B1AVM1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Gm12887B1AVM1 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gm12887B1AVM1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.43■□□□□ 0.06
Gm12887B1AVM1 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.43■□□□□ 0.06
Gm12887B1AVM1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm12887B1AVM1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm12887B1AVM1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm12887B1AVM1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm12887B1AVM1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm12887B1AVM1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
Gm12887B1AVM1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Gm12887B1AVM1 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Gm12887B1AVM1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm12887B1AVM1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.43■□□□□ 0.06
Gm12887B1AVM1 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.43■□□□□ 0.06
Gm12887B1AVM1 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Gm12887B1AVM1 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm12887B1AVM1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm12887B1AVM1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm12887B1AVM1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm12887B1AVM1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Gm12887B1AVM1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.43■□□□□ 0.06
Gm12887B1AVM1 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm12887B1AVM1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.42■□□□□ 0.06
Gm12887B1AVM1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm12887B1AVM1 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm12887B1AVM1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC15.42■□□□□ 0.06
Gm12887B1AVM1 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Gm12887B1AVM1 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.42■□□□□ 0.06
Gm12887B1AVM1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Gm12887B1AVM1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm12887B1AVM1 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm12887B1AVM1 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Gm12887B1AVM1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm12887B1AVM1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Gm12887B1AVM1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Gm12887B1AVM1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Gm12887B1AVM1 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.42■□□□□ 0.06
Gm12887B1AVM1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Gm12887B1AVM1 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.42■□□□□ 0.06
Gm12887B1AVM1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Gm12887B1AVM1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Gm12887B1AVM1 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm12887B1AVM1 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Gm12887B1AVM1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Gm12887B1AVM1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm12887B1AVM1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm12887B1AVM1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm12887B1AVM1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Gm12887B1AVM1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Gm12887B1AVM1 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Gm12887B1AVM1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC15.41■□□□□ 0.06
Gm12887B1AVM1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC15.41■□□□□ 0.06
Gm12887B1AVM1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC15.41■□□□□ 0.06
Gm12887B1AVM1 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.41■□□□□ 0.06
Gm12887B1AVM1 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm12887B1AVM1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm12887B1AVM1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm12887B1AVM1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Gm12887B1AVM1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Gm12887B1AVM1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.4■□□□□ 0.06
Gm12887B1AVM1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.4■□□□□ 0.06
Gm12887B1AVM1 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Gm12887B1AVM1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm12887B1AVM1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm12887B1AVM1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.4■□□□□ 0.06
Gm12887B1AVM1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm12887B1AVM1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Gm12887B1AVM1 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.4■□□□□ 0.06
Gm12887B1AVM1 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.4■□□□□ 0.06
Gm12887B1AVM1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm12887B1AVM1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm12887B1AVM1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Gm12887B1AVM1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Gm12887B1AVM1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm12887B1AVM1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Gm12887B1AVM1 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm12887B1AVM1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm12887B1AVM1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Gm12887B1AVM1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm12887B1AVM1 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm12887B1AVM1 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Gm12887B1AVM1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Gm12887B1AVM1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.39■□□□□ 0.05
Gm12887B1AVM1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm12887B1AVM1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm12887B1AVM1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm12887B1AVM1 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm12887B1AVM1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Gm12887B1AVM1 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm12887B1AVM1 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm12887B1AVM1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm12887B1AVM1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Gm12887B1AVM1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC15.39■□□□□ 0.05
Gm12887B1AVM1 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC15.39■□□□□ 0.05
Gm12887B1AVM1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms