Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn1aA2APX8 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Scn1aA2APX8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.1■□□□□ 0.81
Scn1aA2APX8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.1■□□□□ 0.81
Scn1aA2APX8 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn1aA2APX8 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Scn1aA2APX8 Gm6365-201ENSMUST00000054711 744 ntBASIC20.1■□□□□ 0.81
Scn1aA2APX8 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.1■□□□□ 0.81
Scn1aA2APX8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scn1aA2APX8 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Scn1aA2APX8 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Scn1aA2APX8 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Scn1aA2APX8 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scn1aA2APX8 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scn1aA2APX8 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Scn1aA2APX8 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Scn1aA2APX8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scn1aA2APX8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.09■□□□□ 0.81
Scn1aA2APX8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.09■□□□□ 0.81
Scn1aA2APX8 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scn1aA2APX8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
Scn1aA2APX8 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scn1aA2APX8 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.09■□□□□ 0.81
Scn1aA2APX8 Gm26524-201ENSMUST00000192339 390 ntBASIC20.09■□□□□ 0.81
Scn1aA2APX8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.09■□□□□ 0.81
Scn1aA2APX8 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scn1aA2APX8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Scn1aA2APX8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scn1aA2APX8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Scn1aA2APX8 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Scn1aA2APX8 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scn1aA2APX8 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Scn1aA2APX8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.08■□□□□ 0.8
Scn1aA2APX8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Scn1aA2APX8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.08■□□□□ 0.8
Scn1aA2APX8 Mir5133-201ENSMUST00000174955 77 ntBASIC20.08■□□□□ 0.8
Scn1aA2APX8 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scn1aA2APX8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scn1aA2APX8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Scn1aA2APX8 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Scn1aA2APX8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn1aA2APX8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.07■□□□□ 0.8
Scn1aA2APX8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn1aA2APX8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn1aA2APX8 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scn1aA2APX8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
Scn1aA2APX8 Gm7290-201ENSMUST00000104990 617 ntBASIC20.07■□□□□ 0.8
Scn1aA2APX8 Gm12918-201ENSMUST00000120234 636 ntBASIC20.07■□□□□ 0.8
Scn1aA2APX8 Gm15710-201ENSMUST00000121821 636 ntBASIC20.07■□□□□ 0.8
Scn1aA2APX8 Gm5075-201ENSMUST00000196916 622 ntBASIC20.07■□□□□ 0.8
Scn1aA2APX8 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.07■□□□□ 0.8
Scn1aA2APX8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.07■□□□□ 0.8
Scn1aA2APX8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.07■□□□□ 0.8
Scn1aA2APX8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Scn1aA2APX8 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn1aA2APX8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn1aA2APX8 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn1aA2APX8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Scn1aA2APX8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.06■□□□□ 0.8
Scn1aA2APX8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn1aA2APX8 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.06■□□□□ 0.8
Scn1aA2APX8 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn1aA2APX8 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scn1aA2APX8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Scn1aA2APX8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.06■□□□□ 0.8
Scn1aA2APX8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Scn1aA2APX8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.05■□□□□ 0.8
Scn1aA2APX8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn1aA2APX8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn1aA2APX8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn1aA2APX8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn1aA2APX8 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scn1aA2APX8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Scn1aA2APX8 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scn1aA2APX8 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn1aA2APX8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn1aA2APX8 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn1aA2APX8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn1aA2APX8 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.04■□□□□ 0.8
Scn1aA2APX8 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn1aA2APX8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn1aA2APX8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scn1aA2APX8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.04■□□□□ 0.8
Scn1aA2APX8 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Scn1aA2APX8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn1aA2APX8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.03■□□□□ 0.8
Scn1aA2APX8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn1aA2APX8 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn1aA2APX8 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn1aA2APX8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn1aA2APX8 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn1aA2APX8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Scn1aA2APX8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Scn1aA2APX8 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.03■□□□□ 0.8
Scn1aA2APX8 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.03■□□□□ 0.8
Scn1aA2APX8 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn1aA2APX8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn1aA2APX8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn1aA2APX8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scn1aA2APX8 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms