Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Ubr4A2AN08 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ubr4A2AN08 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Ubr4A2AN08 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Ubr4A2AN08 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Ubr4A2AN08 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ubr4A2AN08 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Ubr4A2AN08 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Ubr4A2AN08 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ubr4A2AN08 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC10.23□□□□□ -0.77
Ubr4A2AN08 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ubr4A2AN08 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC10.23□□□□□ -0.77
Ubr4A2AN08 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC10.23□□□□□ -0.77
Ubr4A2AN08 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC10.23□□□□□ -0.77
Ubr4A2AN08 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ubr4A2AN08 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ubr4A2AN08 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Ubr4A2AN08 Gm44549-201ENSMUST00000208351 577 ntBASIC10.23□□□□□ -0.77
Ubr4A2AN08 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC10.23□□□□□ -0.77
Ubr4A2AN08 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ubr4A2AN08 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ubr4A2AN08 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC10.23□□□□□ -0.77
Ubr4A2AN08 Gm42545-201ENSMUST00000202755 922 ntBASIC10.23□□□□□ -0.77
Ubr4A2AN08 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ubr4A2AN08 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ubr4A2AN08 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Ubr4A2AN08 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ubr4A2AN08 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ubr4A2AN08 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ubr4A2AN08 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Ubr4A2AN08 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ubr4A2AN08 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Ubr4A2AN08 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ubr4A2AN08 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ubr4A2AN08 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ubr4A2AN08 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ubr4A2AN08 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ubr4A2AN08 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ubr4A2AN08 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ubr4A2AN08 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC10.22□□□□□ -0.77
Ubr4A2AN08 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Ubr4A2AN08 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ubr4A2AN08 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
Ubr4A2AN08 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC10.22□□□□□ -0.77
Ubr4A2AN08 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ubr4A2AN08 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Ubr4A2AN08 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ubr4A2AN08 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Ubr4A2AN08 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Ubr4A2AN08 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC10.21□□□□□ -0.77
Ubr4A2AN08 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Ubr4A2AN08 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC10.21□□□□□ -0.77
Ubr4A2AN08 Gm10175-201ENSMUST00000086013 645 ntBASIC10.21□□□□□ -0.77
Ubr4A2AN08 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Ubr4A2AN08 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ubr4A2AN08 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ubr4A2AN08 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Ubr4A2AN08 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Ubr4A2AN08 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ubr4A2AN08 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ubr4A2AN08 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Ubr4A2AN08 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Ubr4A2AN08 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC10.21□□□□□ -0.78
Ubr4A2AN08 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Ubr4A2AN08 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC10.21□□□□□ -0.78
Ubr4A2AN08 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Ubr4A2AN08 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ubr4A2AN08 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ubr4A2AN08 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Ubr4A2AN08 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ubr4A2AN08 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ubr4A2AN08 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Ubr4A2AN08 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ubr4A2AN08 Gm18958-201ENSMUST00000174258 762 ntBASIC10.2□□□□□ -0.78
Ubr4A2AN08 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ubr4A2AN08 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ubr4A2AN08 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ubr4A2AN08 Gm15653-201ENSMUST00000119247 907 ntBASIC10.2□□□□□ -0.78
Ubr4A2AN08 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ubr4A2AN08 Gm34391-201ENSMUST00000203706 907 ntBASIC10.2□□□□□ -0.78
Ubr4A2AN08 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ubr4A2AN08 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ubr4A2AN08 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ubr4A2AN08 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ubr4A2AN08 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Ubr4A2AN08 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ubr4A2AN08 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Ubr4A2AN08 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC10.2□□□□□ -0.78
Ubr4A2AN08 Otx2os1-204ENSMUST00000227221 751 ntBASIC10.2□□□□□ -0.78
Ubr4A2AN08 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Ubr4A2AN08 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ubr4A2AN08 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ubr4A2AN08 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ubr4A2AN08 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ubr4A2AN08 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC10.19□□□□□ -0.78
Ubr4A2AN08 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ubr4A2AN08 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Ubr4A2AN08 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Ubr4A2AN08 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Ubr4A2AN08 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms