Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trav12-1A0N8R1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trav12-1A0N8R1 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav12-1A0N8R1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav12-1A0N8R1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav12-1A0N8R1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav12-1A0N8R1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.88■□□□□ 0.13
Trav12-1A0N8R1 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav12-1A0N8R1 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav12-1A0N8R1 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav12-1A0N8R1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav12-1A0N8R1 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav12-1A0N8R1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav12-1A0N8R1 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav12-1A0N8R1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav12-1A0N8R1 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC15.88■□□□□ 0.13
Trav12-1A0N8R1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.88■□□□□ 0.13
Trav12-1A0N8R1 Gm9207-201ENSMUST00000198773 1115 ntBASIC15.88■□□□□ 0.13
Trav12-1A0N8R1 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav12-1A0N8R1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav12-1A0N8R1 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trav12-1A0N8R1 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Trav12-1A0N8R1 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav12-1A0N8R1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav12-1A0N8R1 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Trav12-1A0N8R1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trav12-1A0N8R1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav12-1A0N8R1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Trav12-1A0N8R1 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav12-1A0N8R1 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav12-1A0N8R1 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav12-1A0N8R1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav12-1A0N8R1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav12-1A0N8R1 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12-1A0N8R1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12-1A0N8R1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Trav12-1A0N8R1 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12-1A0N8R1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12-1A0N8R1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trav12-1A0N8R1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12-1A0N8R1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12-1A0N8R1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC15.86■□□□□ 0.13
Trav12-1A0N8R1 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12-1A0N8R1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12-1A0N8R1 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.86■□□□□ 0.13
Trav12-1A0N8R1 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12-1A0N8R1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav12-1A0N8R1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav12-1A0N8R1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav12-1A0N8R1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav12-1A0N8R1 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC15.85■□□□□ 0.13
Trav12-1A0N8R1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav12-1A0N8R1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC15.85■□□□□ 0.13
Trav12-1A0N8R1 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav12-1A0N8R1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav12-1A0N8R1 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav12-1A0N8R1 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav12-1A0N8R1 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trav12-1A0N8R1 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trav12-1A0N8R1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav12-1A0N8R1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav12-1A0N8R1 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav12-1A0N8R1 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav12-1A0N8R1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trav12-1A0N8R1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Trav12-1A0N8R1 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav12-1A0N8R1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav12-1A0N8R1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.84■□□□□ 0.13
Trav12-1A0N8R1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav12-1A0N8R1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav12-1A0N8R1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav12-1A0N8R1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.83■□□□□ 0.12
Trav12-1A0N8R1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav12-1A0N8R1 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav12-1A0N8R1 Gm5576-201ENSMUST00000075809 1236 ntBASIC15.83■□□□□ 0.12
Trav12-1A0N8R1 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav12-1A0N8R1 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav12-1A0N8R1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav12-1A0N8R1 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav12-1A0N8R1 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav12-1A0N8R1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav12-1A0N8R1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav12-1A0N8R1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav12-1A0N8R1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav12-1A0N8R1 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trav12-1A0N8R1 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trav12-1A0N8R1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav12-1A0N8R1 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12-1A0N8R1 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12-1A0N8R1 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12-1A0N8R1 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12-1A0N8R1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12-1A0N8R1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC15.82■□□□□ 0.12
Trav12-1A0N8R1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC15.82■□□□□ 0.12
Trav12-1A0N8R1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC15.82■□□□□ 0.12
Trav12-1A0N8R1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12-1A0N8R1 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Trav12-1A0N8R1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12-1A0N8R1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12-1A0N8R1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms