Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm5580A0A0N4SVP8 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm5580A0A0N4SVP8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Gm5580A0A0N4SVP8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.72■□□□□ 0.91
Gm5580A0A0N4SVP8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Gm5580A0A0N4SVP8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm5580A0A0N4SVP8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Gm5580A0A0N4SVP8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm5580A0A0N4SVP8 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm5580A0A0N4SVP8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Gm5580A0A0N4SVP8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.71■□□□□ 0.91
Gm5580A0A0N4SVP8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm5580A0A0N4SVP8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm5580A0A0N4SVP8 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm5580A0A0N4SVP8 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
Gm5580A0A0N4SVP8 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Gm5580A0A0N4SVP8 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gm5580A0A0N4SVP8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Gm5580A0A0N4SVP8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Gm5580A0A0N4SVP8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Gm5580A0A0N4SVP8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Gm5580A0A0N4SVP8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm5580A0A0N4SVP8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Gm5580A0A0N4SVP8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Gm5580A0A0N4SVP8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm5580A0A0N4SVP8 Gm15039-201ENSMUST00000118914 875 ntBASIC20.7■□□□□ 0.9
Gm5580A0A0N4SVP8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm5580A0A0N4SVP8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm5580A0A0N4SVP8 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm5580A0A0N4SVP8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Gm5580A0A0N4SVP8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Gm5580A0A0N4SVP8 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm5580A0A0N4SVP8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm5580A0A0N4SVP8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm5580A0A0N4SVP8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm5580A0A0N4SVP8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
Gm5580A0A0N4SVP8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.69■□□□□ 0.9
Gm5580A0A0N4SVP8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm5580A0A0N4SVP8 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Gm5580A0A0N4SVP8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.69■□□□□ 0.9
Gm5580A0A0N4SVP8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm5580A0A0N4SVP8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm5580A0A0N4SVP8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.69■□□□□ 0.9
Gm5580A0A0N4SVP8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.69■□□□□ 0.9
Gm5580A0A0N4SVP8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm5580A0A0N4SVP8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gm5580A0A0N4SVP8 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Gm5580A0A0N4SVP8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm5580A0A0N4SVP8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm5580A0A0N4SVP8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm5580A0A0N4SVP8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.68■□□□□ 0.9
Gm5580A0A0N4SVP8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.68■□□□□ 0.9
Gm5580A0A0N4SVP8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.68■□□□□ 0.9
Gm5580A0A0N4SVP8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm5580A0A0N4SVP8 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Gm5580A0A0N4SVP8 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gm5580A0A0N4SVP8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gm5580A0A0N4SVP8 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Gm5580A0A0N4SVP8 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm5580A0A0N4SVP8 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gm5580A0A0N4SVP8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gm5580A0A0N4SVP8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm5580A0A0N4SVP8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm5580A0A0N4SVP8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Gm5580A0A0N4SVP8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.67■□□□□ 0.9
Gm5580A0A0N4SVP8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gm5580A0A0N4SVP8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm5580A0A0N4SVP8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
Gm5580A0A0N4SVP8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Gm5580A0A0N4SVP8 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.66■□□□□ 0.9
Gm5580A0A0N4SVP8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.66■□□□□ 0.9
Gm5580A0A0N4SVP8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm5580A0A0N4SVP8 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gm5580A0A0N4SVP8 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.66■□□□□ 0.9
Gm5580A0A0N4SVP8 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm5580A0A0N4SVP8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm5580A0A0N4SVP8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gm5580A0A0N4SVP8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm5580A0A0N4SVP8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm5580A0A0N4SVP8 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm5580A0A0N4SVP8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm5580A0A0N4SVP8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm5580A0A0N4SVP8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Gm5580A0A0N4SVP8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Gm5580A0A0N4SVP8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Gm5580A0A0N4SVP8 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Gm5580A0A0N4SVP8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm5580A0A0N4SVP8 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm5580A0A0N4SVP8 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Gm5580A0A0N4SVP8 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Gm5580A0A0N4SVP8 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gm5580A0A0N4SVP8 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gm5580A0A0N4SVP8 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gm5580A0A0N4SVP8 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gm5580A0A0N4SVP8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gm5580A0A0N4SVP8 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gm5580A0A0N4SVP8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gm5580A0A0N4SVP8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Gm5580A0A0N4SVP8 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Gm5580A0A0N4SVP8 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms