Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Scn2aA0A0J9YTW6 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Scn2aA0A0J9YTW6 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Scn2aA0A0J9YTW6 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.52■□□□□ 0.4
Scn2aA0A0J9YTW6 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn2aA0A0J9YTW6 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Scn2aA0A0J9YTW6 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn2aA0A0J9YTW6 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn2aA0A0J9YTW6 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn2aA0A0J9YTW6 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Scn2aA0A0J9YTW6 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Scn2aA0A0J9YTW6 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scn2aA0A0J9YTW6 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.52■□□□□ 0.39
Scn2aA0A0J9YTW6 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scn2aA0A0J9YTW6 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scn2aA0A0J9YTW6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Scn2aA0A0J9YTW6 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn2aA0A0J9YTW6 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Scn2aA0A0J9YTW6 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scn2aA0A0J9YTW6 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scn2aA0A0J9YTW6 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.51■□□□□ 0.39
Scn2aA0A0J9YTW6 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.51■□□□□ 0.39
Scn2aA0A0J9YTW6 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scn2aA0A0J9YTW6 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Scn2aA0A0J9YTW6 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scn2aA0A0J9YTW6 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn2aA0A0J9YTW6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn2aA0A0J9YTW6 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn2aA0A0J9YTW6 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn2aA0A0J9YTW6 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn2aA0A0J9YTW6 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn2aA0A0J9YTW6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.5■□□□□ 0.39
Scn2aA0A0J9YTW6 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scn2aA0A0J9YTW6 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn2aA0A0J9YTW6 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scn2aA0A0J9YTW6 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn2aA0A0J9YTW6 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn2aA0A0J9YTW6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scn2aA0A0J9YTW6 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scn2aA0A0J9YTW6 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scn2aA0A0J9YTW6 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scn2aA0A0J9YTW6 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn2aA0A0J9YTW6 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.5■□□□□ 0.39
Scn2aA0A0J9YTW6 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Scn2aA0A0J9YTW6 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn2aA0A0J9YTW6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn2aA0A0J9YTW6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn2aA0A0J9YTW6 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn2aA0A0J9YTW6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scn2aA0A0J9YTW6 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Scn2aA0A0J9YTW6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn2aA0A0J9YTW6 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
Scn2aA0A0J9YTW6 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.48■□□□□ 0.39
Scn2aA0A0J9YTW6 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn2aA0A0J9YTW6 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn2aA0A0J9YTW6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn2aA0A0J9YTW6 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn2aA0A0J9YTW6 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn2aA0A0J9YTW6 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scn2aA0A0J9YTW6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Scn2aA0A0J9YTW6 Gm7860-201ENSMUST00000121190 879 ntBASIC17.48■□□□□ 0.39
Scn2aA0A0J9YTW6 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Scn2aA0A0J9YTW6 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scn2aA0A0J9YTW6 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Scn2aA0A0J9YTW6 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Scn2aA0A0J9YTW6 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn2aA0A0J9YTW6 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn2aA0A0J9YTW6 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn2aA0A0J9YTW6 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn2aA0A0J9YTW6 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Scn2aA0A0J9YTW6 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Scn2aA0A0J9YTW6 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn2aA0A0J9YTW6 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn2aA0A0J9YTW6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Scn2aA0A0J9YTW6 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn2aA0A0J9YTW6 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn2aA0A0J9YTW6 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Scn2aA0A0J9YTW6 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.47■□□□□ 0.39
Scn2aA0A0J9YTW6 Gm7514-201ENSMUST00000209475 934 ntBASIC17.47■□□□□ 0.39
Scn2aA0A0J9YTW6 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn2aA0A0J9YTW6 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn2aA0A0J9YTW6 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scn2aA0A0J9YTW6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Scn2aA0A0J9YTW6 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn2aA0A0J9YTW6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Scn2aA0A0J9YTW6 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.46■□□□□ 0.39
Scn2aA0A0J9YTW6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Scn2aA0A0J9YTW6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Scn2aA0A0J9YTW6 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Scn2aA0A0J9YTW6 Gm13148-201ENSMUST00000118892 745 ntBASIC17.46■□□□□ 0.39
Scn2aA0A0J9YTW6 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.46■□□□□ 0.39
Scn2aA0A0J9YTW6 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.46■□□□□ 0.39
Scn2aA0A0J9YTW6 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Scn2aA0A0J9YTW6 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn2aA0A0J9YTW6 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn2aA0A0J9YTW6 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.46■□□□□ 0.39
Scn2aA0A0J9YTW6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scn2aA0A0J9YTW6 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.46■□□□□ 0.39
Scn2aA0A0J9YTW6 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.46■□□□□ 0.38
Scn2aA0A0J9YTW6 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms