Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13n-4A0A0G2JG01 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13n-4A0A0G2JG01 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC15.39■□□□□ 0.05
Trav13n-4A0A0G2JG01 Mir6236-201ENSMUST00000184437 123 ntBASIC15.39■□□□□ 0.05
Trav13n-4A0A0G2JG01 Gm42642-201ENSMUST00000200683 355 ntBASIC15.39■□□□□ 0.05
Trav13n-4A0A0G2JG01 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC15.39■□□□□ 0.05
Trav13n-4A0A0G2JG01 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav13n-4A0A0G2JG01 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav13n-4A0A0G2JG01 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13n-4A0A0G2JG01 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13n-4A0A0G2JG01 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13n-4A0A0G2JG01 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13n-4A0A0G2JG01 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13n-4A0A0G2JG01 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13n-4A0A0G2JG01 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13n-4A0A0G2JG01 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13n-4A0A0G2JG01 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13n-4A0A0G2JG01 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13n-4A0A0G2JG01 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13n-4A0A0G2JG01 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13n-4A0A0G2JG01 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
Trav13n-4A0A0G2JG01 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13n-4A0A0G2JG01 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.38■□□□□ 0.05
Trav13n-4A0A0G2JG01 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13n-4A0A0G2JG01 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13n-4A0A0G2JG01 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC15.38■□□□□ 0.05
Trav13n-4A0A0G2JG01 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Trav13n-4A0A0G2JG01 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13n-4A0A0G2JG01 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13n-4A0A0G2JG01 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13n-4A0A0G2JG01 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13n-4A0A0G2JG01 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13n-4A0A0G2JG01 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13n-4A0A0G2JG01 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13n-4A0A0G2JG01 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13n-4A0A0G2JG01 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13n-4A0A0G2JG01 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13n-4A0A0G2JG01 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13n-4A0A0G2JG01 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13n-4A0A0G2JG01 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13n-4A0A0G2JG01 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13n-4A0A0G2JG01 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13n-4A0A0G2JG01 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.37■□□□□ 0.05
Trav13n-4A0A0G2JG01 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC15.37■□□□□ 0.05
Trav13n-4A0A0G2JG01 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Trav13n-4A0A0G2JG01 Gm26571-201ENSMUST00000181399 666 ntBASIC15.37■□□□□ 0.05
Trav13n-4A0A0G2JG01 Gm27405-201ENSMUST00000184201 112 ntBASIC15.37■□□□□ 0.05
Trav13n-4A0A0G2JG01 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav13n-4A0A0G2JG01 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.37■□□□□ 0.05
Trav13n-4A0A0G2JG01 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13n-4A0A0G2JG01 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13n-4A0A0G2JG01 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13n-4A0A0G2JG01 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13n-4A0A0G2JG01 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trav13n-4A0A0G2JG01 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13n-4A0A0G2JG01 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.37■□□□□ 0.05
Trav13n-4A0A0G2JG01 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13n-4A0A0G2JG01 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13n-4A0A0G2JG01 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13n-4A0A0G2JG01 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trav13n-4A0A0G2JG01 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13n-4A0A0G2JG01 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13n-4A0A0G2JG01 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13n-4A0A0G2JG01 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.36■□□□□ 0.05
Trav13n-4A0A0G2JG01 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13n-4A0A0G2JG01 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.36■□□□□ 0.05
Trav13n-4A0A0G2JG01 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC15.36■□□□□ 0.05
Trav13n-4A0A0G2JG01 Gm18671-201ENSMUST00000214826 683 ntBASIC15.36■□□□□ 0.05
Trav13n-4A0A0G2JG01 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.36■□□□□ 0.05
Trav13n-4A0A0G2JG01 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13n-4A0A0G2JG01 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13n-4A0A0G2JG01 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13n-4A0A0G2JG01 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Trav13n-4A0A0G2JG01 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trav13n-4A0A0G2JG01 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13n-4A0A0G2JG01 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13n-4A0A0G2JG01 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13n-4A0A0G2JG01 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13n-4A0A0G2JG01 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trav13n-4A0A0G2JG01 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13n-4A0A0G2JG01 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13n-4A0A0G2JG01 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav13n-4A0A0G2JG01 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13n-4A0A0G2JG01 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.35■□□□□ 0.05
Trav13n-4A0A0G2JG01 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13n-4A0A0G2JG01 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Trav13n-4A0A0G2JG01 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC15.35■□□□□ 0.05
Trav13n-4A0A0G2JG01 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13n-4A0A0G2JG01 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13n-4A0A0G2JG01 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13n-4A0A0G2JG01 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13n-4A0A0G2JG01 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC15.35■□□□□ 0.05
Trav13n-4A0A0G2JG01 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13n-4A0A0G2JG01 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13n-4A0A0G2JG01 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.35■□□□□ 0.05
Trav13n-4A0A0G2JG01 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13n-4A0A0G2JG01 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13n-4A0A0G2JG01 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13n-4A0A0G2JG01 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13n-4A0A0G2JG01 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms