Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7-1A0A0G2JEV5 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7-1A0A0G2JEV5 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Trav7-1A0A0G2JEV5 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav7-1A0A0G2JEV5 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-1A0A0G2JEV5 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-1A0A0G2JEV5 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-1A0A0G2JEV5 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-1A0A0G2JEV5 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-1A0A0G2JEV5 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-1A0A0G2JEV5 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-1A0A0G2JEV5 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-1A0A0G2JEV5 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC14.64□□□□□ -0.07
Trav7-1A0A0G2JEV5 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
Trav7-1A0A0G2JEV5 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-1A0A0G2JEV5 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.64□□□□□ -0.07
Trav7-1A0A0G2JEV5 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-1A0A0G2JEV5 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7-1A0A0G2JEV5 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trav7-1A0A0G2JEV5 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav7-1A0A0G2JEV5 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-1A0A0G2JEV5 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav7-1A0A0G2JEV5 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-1A0A0G2JEV5 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-1A0A0G2JEV5 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav7-1A0A0G2JEV5 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav7-1A0A0G2JEV5 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-1A0A0G2JEV5 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-1A0A0G2JEV5 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-1A0A0G2JEV5 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav7-1A0A0G2JEV5 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-1A0A0G2JEV5 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-1A0A0G2JEV5 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav7-1A0A0G2JEV5 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC14.63□□□□□ -0.07
Trav7-1A0A0G2JEV5 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-1A0A0G2JEV5 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC14.63□□□□□ -0.07
Trav7-1A0A0G2JEV5 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav7-1A0A0G2JEV5 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-1A0A0G2JEV5 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-1A0A0G2JEV5 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-1A0A0G2JEV5 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Trav7-1A0A0G2JEV5 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-1A0A0G2JEV5 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7-1A0A0G2JEV5 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-1A0A0G2JEV5 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-1A0A0G2JEV5 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-1A0A0G2JEV5 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-1A0A0G2JEV5 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav7-1A0A0G2JEV5 Serp2-204ENSMUST00000228055 705 ntBASIC14.62□□□□□ -0.07
Trav7-1A0A0G2JEV5 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-1A0A0G2JEV5 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Trav7-1A0A0G2JEV5 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-1A0A0G2JEV5 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.62□□□□□ -0.07
Trav7-1A0A0G2JEV5 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7-1A0A0G2JEV5 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Trav7-1A0A0G2JEV5 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7-1A0A0G2JEV5 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7-1A0A0G2JEV5 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7-1A0A0G2JEV5 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7-1A0A0G2JEV5 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav7-1A0A0G2JEV5 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7-1A0A0G2JEV5 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC14.61□□□□□ -0.07
Trav7-1A0A0G2JEV5 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7-1A0A0G2JEV5 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav7-1A0A0G2JEV5 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7-1A0A0G2JEV5 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7-1A0A0G2JEV5 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7-1A0A0G2JEV5 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7-1A0A0G2JEV5 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7-1A0A0G2JEV5 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav7-1A0A0G2JEV5 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7-1A0A0G2JEV5 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7-1A0A0G2JEV5 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7-1A0A0G2JEV5 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7-1A0A0G2JEV5 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.6□□□□□ -0.07
Trav7-1A0A0G2JEV5 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC14.6□□□□□ -0.07
Trav7-1A0A0G2JEV5 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7-1A0A0G2JEV5 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.6□□□□□ -0.07
Trav7-1A0A0G2JEV5 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7-1A0A0G2JEV5 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7-1A0A0G2JEV5 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7-1A0A0G2JEV5 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav7-1A0A0G2JEV5 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7-1A0A0G2JEV5 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7-1A0A0G2JEV5 Gm10209-201ENSMUST00000203397 1607 ntBASIC14.59□□□□□ -0.07
Trav7-1A0A0G2JEV5 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7-1A0A0G2JEV5 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Trav7-1A0A0G2JEV5 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7-1A0A0G2JEV5 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7-1A0A0G2JEV5 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7-1A0A0G2JEV5 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Trav7-1A0A0G2JEV5 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav7-1A0A0G2JEV5 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7-1A0A0G2JEV5 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7-1A0A0G2JEV5 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7-1A0A0G2JEV5 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7-1A0A0G2JEV5 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Trav7-1A0A0G2JEV5 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav7-1A0A0G2JEV5 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7-1A0A0G2JEV5 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms