Protein–RNA interactions for Protein: A0A0B4J1N1

C920008G01Rik, RIKEN cDNA C920008G01 gene (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C920008G01RikA0A0B4J1N1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
C920008G01RikA0A0B4J1N1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
C920008G01RikA0A0B4J1N1 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
C920008G01RikA0A0B4J1N1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
C920008G01RikA0A0B4J1N1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C920008G01RikA0A0B4J1N1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C920008G01RikA0A0B4J1N1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C920008G01RikA0A0B4J1N1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C920008G01RikA0A0B4J1N1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
C920008G01RikA0A0B4J1N1 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C920008G01RikA0A0B4J1N1 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C920008G01RikA0A0B4J1N1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
C920008G01RikA0A0B4J1N1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
C920008G01RikA0A0B4J1N1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
C920008G01RikA0A0B4J1N1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C920008G01RikA0A0B4J1N1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C920008G01RikA0A0B4J1N1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C920008G01RikA0A0B4J1N1 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C920008G01RikA0A0B4J1N1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C920008G01RikA0A0B4J1N1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
C920008G01RikA0A0B4J1N1 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
C920008G01RikA0A0B4J1N1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C920008G01RikA0A0B4J1N1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
C920008G01RikA0A0B4J1N1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
C920008G01RikA0A0B4J1N1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
C920008G01RikA0A0B4J1N1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
C920008G01RikA0A0B4J1N1 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
C920008G01RikA0A0B4J1N1 Gm43702-201ENSMUST00000198772 2546 ntBASIC13.15□□□□□ -0.3
C920008G01RikA0A0B4J1N1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C920008G01RikA0A0B4J1N1 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC13.15□□□□□ -0.3
C920008G01RikA0A0B4J1N1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C920008G01RikA0A0B4J1N1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
C920008G01RikA0A0B4J1N1 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
C920008G01RikA0A0B4J1N1 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
C920008G01RikA0A0B4J1N1 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC13.14□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
C920008G01RikA0A0B4J1N1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Gm20100-201ENSMUST00000209418 2272 ntBASIC13.13□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Gm9885-202ENSMUST00000186234 2209 ntBASIC13.13□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
C920008G01RikA0A0B4J1N1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C920008G01RikA0A0B4J1N1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC13.12□□□□□ -0.31
C920008G01RikA0A0B4J1N1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
C920008G01RikA0A0B4J1N1 AC151971.4-201ENSMUST00000214717 704 ntBASIC13.12□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C920008G01RikA0A0B4J1N1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC13.12□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C920008G01RikA0A0B4J1N1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC13.12□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
C920008G01RikA0A0B4J1N1 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms