Protein–RNA interactions for Protein: A0A0B4J1I1

Igkv16-104, Immunoglobulin kappa variable 16-104 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv16-104A0A0B4J1I1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Igkv16-104A0A0B4J1I1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Igkv16-104A0A0B4J1I1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Igkv16-104A0A0B4J1I1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Igkv16-104A0A0B4J1I1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Igkv16-104A0A0B4J1I1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Igkv16-104A0A0B4J1I1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Igkv16-104A0A0B4J1I1 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Igkv16-104A0A0B4J1I1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Igkv16-104A0A0B4J1I1 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Igkv16-104A0A0B4J1I1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Igkv16-104A0A0B4J1I1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Igkv16-104A0A0B4J1I1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Igkv16-104A0A0B4J1I1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Igkv16-104A0A0B4J1I1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Igkv16-104A0A0B4J1I1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.42■□□□□ 0.7
Igkv16-104A0A0B4J1I1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Igkv16-104A0A0B4J1I1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Igkv16-104A0A0B4J1I1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv16-104A0A0B4J1I1 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.41■□□□□ 0.7
Igkv16-104A0A0B4J1I1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv16-104A0A0B4J1I1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv16-104A0A0B4J1I1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv16-104A0A0B4J1I1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv16-104A0A0B4J1I1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv16-104A0A0B4J1I1 Gm5643-201ENSMUST00000117081 966 ntBASIC19.41■□□□□ 0.7
Igkv16-104A0A0B4J1I1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv16-104A0A0B4J1I1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv16-104A0A0B4J1I1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv16-104A0A0B4J1I1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv16-104A0A0B4J1I1 Dio3-201ENSMUST00000097228 1449 ntBASIC19.41■□□□□ 0.7
Igkv16-104A0A0B4J1I1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv16-104A0A0B4J1I1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Igkv16-104A0A0B4J1I1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Igkv16-104A0A0B4J1I1 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Igkv16-104A0A0B4J1I1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Igkv16-104A0A0B4J1I1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Igkv16-104A0A0B4J1I1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Igkv16-104A0A0B4J1I1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Mir7071-201ENSMUST00000184847 69 ntBASIC19.39■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.39■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.39■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.39■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.38■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Igkv16-104A0A0B4J1I1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.37■□□□□ 0.69
Igkv16-104A0A0B4J1I1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.37■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Gm44549-201ENSMUST00000208351 577 ntBASIC19.37■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.37■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv16-104A0A0B4J1I1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.36■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Mir6982-201ENSMUST00000184354 68 ntBASIC19.36■□□□□ 0.69
Igkv16-104A0A0B4J1I1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.36■□□□□ 0.69
Igkv16-104A0A0B4J1I1 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.36■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.35■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Igkv16-104A0A0B4J1I1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.34■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.34■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.34■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.34■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Igkv16-104A0A0B4J1I1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Igkv16-104A0A0B4J1I1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms