Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv20A0A0B4J1H5 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.09■□□□□ 0.33
Trbv20A0A0B4J1H5 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv20A0A0B4J1H5 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trbv20A0A0B4J1H5 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Trbv20A0A0B4J1H5 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trbv20A0A0B4J1H5 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.08■□□□□ 0.33
Trbv20A0A0B4J1H5 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trbv20A0A0B4J1H5 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trbv20A0A0B4J1H5 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trbv20A0A0B4J1H5 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trbv20A0A0B4J1H5 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.08■□□□□ 0.32
Trbv20A0A0B4J1H5 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Trbv20A0A0B4J1H5 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.08■□□□□ 0.32
Trbv20A0A0B4J1H5 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Trbv20A0A0B4J1H5 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trbv20A0A0B4J1H5 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv20A0A0B4J1H5 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trbv20A0A0B4J1H5 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv20A0A0B4J1H5 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv20A0A0B4J1H5 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.07■□□□□ 0.32
Trbv20A0A0B4J1H5 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trbv20A0A0B4J1H5 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv20A0A0B4J1H5 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv20A0A0B4J1H5 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv20A0A0B4J1H5 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv20A0A0B4J1H5 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trbv20A0A0B4J1H5 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.07■□□□□ 0.32
Trbv20A0A0B4J1H5 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trbv20A0A0B4J1H5 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.07■□□□□ 0.32
Trbv20A0A0B4J1H5 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv20A0A0B4J1H5 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv20A0A0B4J1H5 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.06■□□□□ 0.32
Trbv20A0A0B4J1H5 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv20A0A0B4J1H5 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv20A0A0B4J1H5 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv20A0A0B4J1H5 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv20A0A0B4J1H5 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv20A0A0B4J1H5 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv20A0A0B4J1H5 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.06■□□□□ 0.32
Trbv20A0A0B4J1H5 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv20A0A0B4J1H5 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv20A0A0B4J1H5 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trbv20A0A0B4J1H5 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trbv20A0A0B4J1H5 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trbv20A0A0B4J1H5 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Trbv20A0A0B4J1H5 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv20A0A0B4J1H5 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv20A0A0B4J1H5 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Trbv20A0A0B4J1H5 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv20A0A0B4J1H5 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv20A0A0B4J1H5 Gm13238-201ENSMUST00000117655 780 ntBASIC17.05■□□□□ 0.32
Trbv20A0A0B4J1H5 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.05■□□□□ 0.32
Trbv20A0A0B4J1H5 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv20A0A0B4J1H5 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.05■□□□□ 0.32
Trbv20A0A0B4J1H5 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.05■□□□□ 0.32
Trbv20A0A0B4J1H5 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.05■□□□□ 0.32
Trbv20A0A0B4J1H5 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv20A0A0B4J1H5 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv20A0A0B4J1H5 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.05■□□□□ 0.32
Trbv20A0A0B4J1H5 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv20A0A0B4J1H5 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trbv20A0A0B4J1H5 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Trbv20A0A0B4J1H5 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trbv20A0A0B4J1H5 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trbv20A0A0B4J1H5 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv20A0A0B4J1H5 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv20A0A0B4J1H5 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.04■□□□□ 0.32
Trbv20A0A0B4J1H5 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv20A0A0B4J1H5 Etf1-202ENSMUST00000180351 108 ntBASIC17.04■□□□□ 0.32
Trbv20A0A0B4J1H5 Gm43566-201ENSMUST00000196851 808 ntBASIC17.04■□□□□ 0.32
Trbv20A0A0B4J1H5 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv20A0A0B4J1H5 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Trbv20A0A0B4J1H5 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.04■□□□□ 0.32
Trbv20A0A0B4J1H5 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trbv20A0A0B4J1H5 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trbv20A0A0B4J1H5 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trbv20A0A0B4J1H5 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv20A0A0B4J1H5 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv20A0A0B4J1H5 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trbv20A0A0B4J1H5 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.04■□□□□ 0.32
Trbv20A0A0B4J1H5 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.03■□□□□ 0.32
Trbv20A0A0B4J1H5 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv20A0A0B4J1H5 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv20A0A0B4J1H5 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trbv20A0A0B4J1H5 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.03■□□□□ 0.32
Trbv20A0A0B4J1H5 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.03■□□□□ 0.32
Trbv20A0A0B4J1H5 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trbv20A0A0B4J1H5 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.03■□□□□ 0.32
Trbv20A0A0B4J1H5 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv20A0A0B4J1H5 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trbv20A0A0B4J1H5 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trbv20A0A0B4J1H5 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.02■□□□□ 0.32
Trbv20A0A0B4J1H5 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trbv20A0A0B4J1H5 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trbv20A0A0B4J1H5 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trbv20A0A0B4J1H5 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.02■□□□□ 0.32
Trbv20A0A0B4J1H5 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.02■□□□□ 0.32
Trbv20A0A0B4J1H5 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.02■□□□□ 0.32
Trbv20A0A0B4J1H5 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms