Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trbv13-3A0A0B4J1H2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC14.87□□□□□ -0.03
Trbv13-3A0A0B4J1H2 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Gm16464-201ENSMUST00000117815 1095 ntBASIC14.87□□□□□ -0.03
Trbv13-3A0A0B4J1H2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC14.86□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Gm10399-202ENSMUST00000202768 748 ntBASIC14.86□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC14.85□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC14.84□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC14.84□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC14.84□□□□□ -0.03
Trbv13-3A0A0B4J1H2 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Gm43530-201ENSMUST00000195920 274 ntBASIC14.84□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trbv13-3A0A0B4J1H2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv13-3A0A0B4J1H2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trbv13-3A0A0B4J1H2 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv13-3A0A0B4J1H2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv13-3A0A0B4J1H2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv13-3A0A0B4J1H2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv13-3A0A0B4J1H2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv13-3A0A0B4J1H2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv13-3A0A0B4J1H2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv13-3A0A0B4J1H2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv13-3A0A0B4J1H2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trbv13-3A0A0B4J1H2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv13-3A0A0B4J1H2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv13-3A0A0B4J1H2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv13-3A0A0B4J1H2 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv13-3A0A0B4J1H2 Gm11175-201ENSMUST00000116172 543 ntBASIC14.82□□□□□ -0.04
Trbv13-3A0A0B4J1H2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv13-3A0A0B4J1H2 AC154266.1-201ENSMUST00000223190 503 ntBASIC14.82□□□□□ -0.04
Trbv13-3A0A0B4J1H2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC14.82□□□□□ -0.04
Trbv13-3A0A0B4J1H2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trbv13-3A0A0B4J1H2 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv13-3A0A0B4J1H2 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trbv13-3A0A0B4J1H2 Gm32699-201ENSMUST00000221728 1988 ntBASIC14.82□□□□□ -0.04
Trbv13-3A0A0B4J1H2 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.81□□□□□ -0.04
Trbv13-3A0A0B4J1H2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv13-3A0A0B4J1H2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv13-3A0A0B4J1H2 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv13-3A0A0B4J1H2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv13-3A0A0B4J1H2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv13-3A0A0B4J1H2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trbv13-3A0A0B4J1H2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms