Protein–RNA interactions for Protein: A0A0B4J1G8

Trbv2, T cell receptor beta, variable 2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv2A0A0B4J1G8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv2A0A0B4J1G8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trbv2A0A0B4J1G8 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trbv2A0A0B4J1G8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.91■□□□□ 0.3
Trbv2A0A0B4J1G8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv2A0A0B4J1G8 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv2A0A0B4J1G8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv2A0A0B4J1G8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trbv2A0A0B4J1G8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv2A0A0B4J1G8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv2A0A0B4J1G8 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv2A0A0B4J1G8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv2A0A0B4J1G8 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv2A0A0B4J1G8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv2A0A0B4J1G8 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.9■□□□□ 0.3
Trbv2A0A0B4J1G8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv2A0A0B4J1G8 Rarb-207ENSMUST00000225921 2756 ntBASIC16.9■□□□□ 0.3
Trbv2A0A0B4J1G8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv2A0A0B4J1G8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv2A0A0B4J1G8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv2A0A0B4J1G8 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Trbv2A0A0B4J1G8 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv2A0A0B4J1G8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv2A0A0B4J1G8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Trbv2A0A0B4J1G8 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv2A0A0B4J1G8 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Trbv2A0A0B4J1G8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.3
Trbv2A0A0B4J1G8 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trbv2A0A0B4J1G8 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Trbv2A0A0B4J1G8 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.89■□□□□ 0.3
Trbv2A0A0B4J1G8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv2A0A0B4J1G8 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.89■□□□□ 0.29
Trbv2A0A0B4J1G8 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv2A0A0B4J1G8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.89■□□□□ 0.29
Trbv2A0A0B4J1G8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv2A0A0B4J1G8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv2A0A0B4J1G8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
Trbv2A0A0B4J1G8 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv2A0A0B4J1G8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv2A0A0B4J1G8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv2A0A0B4J1G8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv2A0A0B4J1G8 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv2A0A0B4J1G8 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv2A0A0B4J1G8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv2A0A0B4J1G8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv2A0A0B4J1G8 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.88■□□□□ 0.29
Trbv2A0A0B4J1G8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trbv2A0A0B4J1G8 Gm22238-201ENSMUST00000175222 88 ntBASIC16.88■□□□□ 0.29
Trbv2A0A0B4J1G8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv2A0A0B4J1G8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv2A0A0B4J1G8 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv2A0A0B4J1G8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv2A0A0B4J1G8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv2A0A0B4J1G8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv2A0A0B4J1G8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv2A0A0B4J1G8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv2A0A0B4J1G8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.87■□□□□ 0.29
Trbv2A0A0B4J1G8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv2A0A0B4J1G8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.87■□□□□ 0.29
Trbv2A0A0B4J1G8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv2A0A0B4J1G8 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv2A0A0B4J1G8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv2A0A0B4J1G8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.87■□□□□ 0.29
Trbv2A0A0B4J1G8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.87■□□□□ 0.29
Trbv2A0A0B4J1G8 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv2A0A0B4J1G8 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Trbv2A0A0B4J1G8 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv2A0A0B4J1G8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv2A0A0B4J1G8 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.86■□□□□ 0.29
Trbv2A0A0B4J1G8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.86■□□□□ 0.29
Trbv2A0A0B4J1G8 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.86■□□□□ 0.29
Trbv2A0A0B4J1G8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.86■□□□□ 0.29
Trbv2A0A0B4J1G8 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv2A0A0B4J1G8 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv2A0A0B4J1G8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv2A0A0B4J1G8 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.86■□□□□ 0.29
Trbv2A0A0B4J1G8 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.86■□□□□ 0.29
Trbv2A0A0B4J1G8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv2A0A0B4J1G8 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv2A0A0B4J1G8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.85■□□□□ 0.29
Trbv2A0A0B4J1G8 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv2A0A0B4J1G8 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv2A0A0B4J1G8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv2A0A0B4J1G8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Trbv2A0A0B4J1G8 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.85■□□□□ 0.29
Trbv2A0A0B4J1G8 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv2A0A0B4J1G8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.85■□□□□ 0.29
Trbv2A0A0B4J1G8 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.85■□□□□ 0.29
Trbv2A0A0B4J1G8 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv2A0A0B4J1G8 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv2A0A0B4J1G8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
Trbv2A0A0B4J1G8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv2A0A0B4J1G8 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv2A0A0B4J1G8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Trbv2A0A0B4J1G8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv2A0A0B4J1G8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv2A0A0B4J1G8 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv2A0A0B4J1G8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv2A0A0B4J1G8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv2A0A0B4J1G8 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms