Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BC053393A0A0B4J1F6 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BC053393A0A0B4J1F6 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC15.22■□□□□ 0.03
BC053393A0A0B4J1F6 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BC053393A0A0B4J1F6 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BC053393A0A0B4J1F6 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.22■□□□□ 0.03
BC053393A0A0B4J1F6 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BC053393A0A0B4J1F6 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BC053393A0A0B4J1F6 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BC053393A0A0B4J1F6 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.22■□□□□ 0.03
BC053393A0A0B4J1F6 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
BC053393A0A0B4J1F6 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BC053393A0A0B4J1F6 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BC053393A0A0B4J1F6 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.21■□□□□ 0.03
BC053393A0A0B4J1F6 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BC053393A0A0B4J1F6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
BC053393A0A0B4J1F6 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BC053393A0A0B4J1F6 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BC053393A0A0B4J1F6 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC15.21■□□□□ 0.03
BC053393A0A0B4J1F6 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BC053393A0A0B4J1F6 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.21■□□□□ 0.03
BC053393A0A0B4J1F6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
BC053393A0A0B4J1F6 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BC053393A0A0B4J1F6 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.21■□□□□ 0.03
BC053393A0A0B4J1F6 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
BC053393A0A0B4J1F6 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
BC053393A0A0B4J1F6 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.21■□□□□ 0.02
BC053393A0A0B4J1F6 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
BC053393A0A0B4J1F6 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.2■□□□□ 0.02
BC053393A0A0B4J1F6 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BC053393A0A0B4J1F6 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BC053393A0A0B4J1F6 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.2■□□□□ 0.02
BC053393A0A0B4J1F6 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BC053393A0A0B4J1F6 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
BC053393A0A0B4J1F6 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BC053393A0A0B4J1F6 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BC053393A0A0B4J1F6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
BC053393A0A0B4J1F6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BC053393A0A0B4J1F6 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC15.2■□□□□ 0.02
BC053393A0A0B4J1F6 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
BC053393A0A0B4J1F6 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
BC053393A0A0B4J1F6 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BC053393A0A0B4J1F6 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
BC053393A0A0B4J1F6 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.2■□□□□ 0.02
BC053393A0A0B4J1F6 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
BC053393A0A0B4J1F6 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BC053393A0A0B4J1F6 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BC053393A0A0B4J1F6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BC053393A0A0B4J1F6 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BC053393A0A0B4J1F6 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BC053393A0A0B4J1F6 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.19■□□□□ 0.02
BC053393A0A0B4J1F6 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BC053393A0A0B4J1F6 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.19■□□□□ 0.02
BC053393A0A0B4J1F6 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
BC053393A0A0B4J1F6 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.19■□□□□ 0.02
BC053393A0A0B4J1F6 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BC053393A0A0B4J1F6 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BC053393A0A0B4J1F6 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
BC053393A0A0B4J1F6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BC053393A0A0B4J1F6 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BC053393A0A0B4J1F6 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BC053393A0A0B4J1F6 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BC053393A0A0B4J1F6 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BC053393A0A0B4J1F6 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BC053393A0A0B4J1F6 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BC053393A0A0B4J1F6 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
BC053393A0A0B4J1F6 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
BC053393A0A0B4J1F6 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
BC053393A0A0B4J1F6 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
BC053393A0A0B4J1F6 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
BC053393A0A0B4J1F6 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
BC053393A0A0B4J1F6 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
BC053393A0A0B4J1F6 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
BC053393A0A0B4J1F6 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
BC053393A0A0B4J1F6 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC15.18■□□□□ 0.02
BC053393A0A0B4J1F6 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.18■□□□□ 0.02
BC053393A0A0B4J1F6 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
BC053393A0A0B4J1F6 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
BC053393A0A0B4J1F6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15.17■□□□□ 0.02
BC053393A0A0B4J1F6 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BC053393A0A0B4J1F6 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
BC053393A0A0B4J1F6 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BC053393A0A0B4J1F6 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BC053393A0A0B4J1F6 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
BC053393A0A0B4J1F6 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC15.17■□□□□ 0.02
BC053393A0A0B4J1F6 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
BC053393A0A0B4J1F6 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
BC053393A0A0B4J1F6 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BC053393A0A0B4J1F6 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BC053393A0A0B4J1F6 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BC053393A0A0B4J1F6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
BC053393A0A0B4J1F6 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BC053393A0A0B4J1F6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BC053393A0A0B4J1F6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BC053393A0A0B4J1F6 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BC053393A0A0B4J1F6 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
BC053393A0A0B4J1F6 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BC053393A0A0B4J1F6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BC053393A0A0B4J1F6 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BC053393A0A0B4J1F6 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms