Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ighv1-43A0A0A6YXN5 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.63■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.63■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Gm13148-201ENSMUST00000118892 745 ntBASIC17.61■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Gm12441-201ENSMUST00000121806 588 ntBASIC17.61■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-43A0A0A6YXN5 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-43A0A0A6YXN5 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.61■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-43A0A0A6YXN5 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Gm6211-202ENSMUST00000167849 925 ntBASIC17.6■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.6■□□□□ 0.41
Ighv1-43A0A0A6YXN5 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Ighv1-43A0A0A6YXN5 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.6■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.59■□□□□ 0.41
Ighv1-43A0A0A6YXN5 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Gm4968-201ENSMUST00000071458 858 ntBASIC17.59■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.58■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ighv1-43A0A0A6YXN5 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.58■□□□□ 0.4
Ighv1-43A0A0A6YXN5 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.58■□□□□ 0.4
Ighv1-43A0A0A6YXN5 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.58■□□□□ 0.4
Ighv1-43A0A0A6YXN5 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ighv1-43A0A0A6YXN5 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ighv1-43A0A0A6YXN5 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ighv1-43A0A0A6YXN5 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ighv1-43A0A0A6YXN5 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-43A0A0A6YXN5 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-43A0A0A6YXN5 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-43A0A0A6YXN5 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ighv1-43A0A0A6YXN5 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-43A0A0A6YXN5 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-43A0A0A6YXN5 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Ighv1-43A0A0A6YXN5 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
Ighv1-43A0A0A6YXN5 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-43A0A0A6YXN5 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-43A0A0A6YXN5 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-43A0A0A6YXN5 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-43A0A0A6YXN5 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-43A0A0A6YXN5 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ighv1-43A0A0A6YXN5 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv1-43A0A0A6YXN5 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv1-43A0A0A6YXN5 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ighv1-43A0A0A6YXN5 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ighv1-43A0A0A6YXN5 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ighv1-43A0A0A6YXN5 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.56■□□□□ 0.4
Ighv1-43A0A0A6YXN5 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.56■□□□□ 0.4
Ighv1-43A0A0A6YXN5 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Ighv1-43A0A0A6YXN5 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.56■□□□□ 0.4
Ighv1-43A0A0A6YXN5 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.56■□□□□ 0.4
Ighv1-43A0A0A6YXN5 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv1-43A0A0A6YXN5 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.56■□□□□ 0.4
Ighv1-43A0A0A6YXN5 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv1-43A0A0A6YXN5 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ighv1-43A0A0A6YXN5 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms