Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.85■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC15.85■□□□□ 0.13
Ighv3-4A0A0A6YXF1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC15.85■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv3-4A0A0A6YXF1 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Ighv3-4A0A0A6YXF1 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.84■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC15.84■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ighv3-4A0A0A6YXF1 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.83■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Gm12896-201ENSMUST00000118430 226 ntBASIC15.83■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.83■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.83■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Gm27275-201ENSMUST00000184318 272 ntBASIC15.83■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.82■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.81■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.8■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Mir6982-201ENSMUST00000184354 68 ntBASIC15.8■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Gm2559-201ENSMUST00000201323 363 ntBASIC15.8■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.8■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.79■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ighv3-4A0A0A6YXF1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.79■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.79■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.78■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ighv3-4A0A0A6YXF1 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms