Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbc1A0A0A6YWV4 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbc1A0A0A6YWV4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbc1A0A0A6YWV4 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
Trbc1A0A0A6YWV4 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trbc1A0A0A6YWV4 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbc1A0A0A6YWV4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbc1A0A0A6YWV4 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trbc1A0A0A6YWV4 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Trbc1A0A0A6YWV4 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trbc1A0A0A6YWV4 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.46■□□□□ 0.39
Trbc1A0A0A6YWV4 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.46■□□□□ 0.39
Trbc1A0A0A6YWV4 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trbc1A0A0A6YWV4 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbc1A0A0A6YWV4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trbc1A0A0A6YWV4 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trbc1A0A0A6YWV4 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.45■□□□□ 0.38
Trbc1A0A0A6YWV4 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.45■□□□□ 0.38
Trbc1A0A0A6YWV4 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.45■□□□□ 0.38
Trbc1A0A0A6YWV4 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.45■□□□□ 0.38
Trbc1A0A0A6YWV4 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.45■□□□□ 0.38
Trbc1A0A0A6YWV4 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trbc1A0A0A6YWV4 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trbc1A0A0A6YWV4 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbc1A0A0A6YWV4 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbc1A0A0A6YWV4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbc1A0A0A6YWV4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trbc1A0A0A6YWV4 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.44■□□□□ 0.38
Trbc1A0A0A6YWV4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.44■□□□□ 0.38
Trbc1A0A0A6YWV4 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trbc1A0A0A6YWV4 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trbc1A0A0A6YWV4 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.44■□□□□ 0.38
Trbc1A0A0A6YWV4 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbc1A0A0A6YWV4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trbc1A0A0A6YWV4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbc1A0A0A6YWV4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.43■□□□□ 0.38
Trbc1A0A0A6YWV4 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbc1A0A0A6YWV4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbc1A0A0A6YWV4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
Trbc1A0A0A6YWV4 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trbc1A0A0A6YWV4 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbc1A0A0A6YWV4 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trbc1A0A0A6YWV4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trbc1A0A0A6YWV4 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbc1A0A0A6YWV4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbc1A0A0A6YWV4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.42■□□□□ 0.38
Trbc1A0A0A6YWV4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbc1A0A0A6YWV4 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trbc1A0A0A6YWV4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbc1A0A0A6YWV4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trbc1A0A0A6YWV4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbc1A0A0A6YWV4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbc1A0A0A6YWV4 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trbc1A0A0A6YWV4 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.42■□□□□ 0.38
Trbc1A0A0A6YWV4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.42■□□□□ 0.38
Trbc1A0A0A6YWV4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbc1A0A0A6YWV4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbc1A0A0A6YWV4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Trbc1A0A0A6YWV4 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbc1A0A0A6YWV4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbc1A0A0A6YWV4 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbc1A0A0A6YWV4 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trbc1A0A0A6YWV4 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbc1A0A0A6YWV4 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trbc1A0A0A6YWV4 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbc1A0A0A6YWV4 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbc1A0A0A6YWV4 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.41■□□□□ 0.38
Trbc1A0A0A6YWV4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.41■□□□□ 0.38
Trbc1A0A0A6YWV4 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbc1A0A0A6YWV4 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trbc1A0A0A6YWV4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.41■□□□□ 0.38
Trbc1A0A0A6YWV4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Trbc1A0A0A6YWV4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trbc1A0A0A6YWV4 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbc1A0A0A6YWV4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbc1A0A0A6YWV4 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbc1A0A0A6YWV4 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trbc1A0A0A6YWV4 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trbc1A0A0A6YWV4 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbc1A0A0A6YWV4 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbc1A0A0A6YWV4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbc1A0A0A6YWV4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trbc1A0A0A6YWV4 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbc1A0A0A6YWV4 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trbc1A0A0A6YWV4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Trbc1A0A0A6YWV4 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.4■□□□□ 0.38
Trbc1A0A0A6YWV4 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trbc1A0A0A6YWV4 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.39■□□□□ 0.38
Trbc1A0A0A6YWV4 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbc1A0A0A6YWV4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbc1A0A0A6YWV4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.39■□□□□ 0.37
Trbc1A0A0A6YWV4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbc1A0A0A6YWV4 Gm9988-201ENSMUST00000069786 435 ntBASIC17.39■□□□□ 0.37
Trbc1A0A0A6YWV4 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbc1A0A0A6YWV4 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbc1A0A0A6YWV4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbc1A0A0A6YWV4 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbc1A0A0A6YWV4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trbc1A0A0A6YWV4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trbc1A0A0A6YWV4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms