Protein–RNA interactions for Protein: A0A087WQQ0

Gm28557, Predicted gene 28557, mousemouse

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28557A0A087WQQ0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28557A0A087WQQ0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28557A0A087WQQ0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.1■□□□□ 0.33
Gm28557A0A087WQQ0 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Gm28557A0A087WQQ0 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28557A0A087WQQ0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28557A0A087WQQ0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Gm28557A0A087WQQ0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28557A0A087WQQ0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28557A0A087WQQ0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Gm28557A0A087WQQ0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28557A0A087WQQ0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm28557A0A087WQQ0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28557A0A087WQQ0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28557A0A087WQQ0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28557A0A087WQQ0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28557A0A087WQQ0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28557A0A087WQQ0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.09■□□□□ 0.33
Gm28557A0A087WQQ0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28557A0A087WQQ0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28557A0A087WQQ0 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28557A0A087WQQ0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28557A0A087WQQ0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm28557A0A087WQQ0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm28557A0A087WQQ0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm28557A0A087WQQ0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.08■□□□□ 0.33
Gm28557A0A087WQQ0 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm28557A0A087WQQ0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.08■□□□□ 0.33
Gm28557A0A087WQQ0 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm28557A0A087WQQ0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm28557A0A087WQQ0 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm28557A0A087WQQ0 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Gm28557A0A087WQQ0 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.08■□□□□ 0.32
Gm28557A0A087WQQ0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.08■□□□□ 0.32
Gm28557A0A087WQQ0 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.08■□□□□ 0.32
Gm28557A0A087WQQ0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm28557A0A087WQQ0 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.08■□□□□ 0.32
Gm28557A0A087WQQ0 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm28557A0A087WQQ0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm28557A0A087WQQ0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm28557A0A087WQQ0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm28557A0A087WQQ0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm28557A0A087WQQ0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28557A0A087WQQ0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28557A0A087WQQ0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28557A0A087WQQ0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.07■□□□□ 0.32
Gm28557A0A087WQQ0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28557A0A087WQQ0 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28557A0A087WQQ0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28557A0A087WQQ0 Gm5812-201ENSMUST00000061073 957 ntBASIC17.07■□□□□ 0.32
Gm28557A0A087WQQ0 Gm9959-201ENSMUST00000068277 390 ntBASIC17.07■□□□□ 0.32
Gm28557A0A087WQQ0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Gm28557A0A087WQQ0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Gm28557A0A087WQQ0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28557A0A087WQQ0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28557A0A087WQQ0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28557A0A087WQQ0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28557A0A087WQQ0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28557A0A087WQQ0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28557A0A087WQQ0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Gm28557A0A087WQQ0 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28557A0A087WQQ0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Gm28557A0A087WQQ0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Gm28557A0A087WQQ0 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.06■□□□□ 0.32
Gm28557A0A087WQQ0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.06■□□□□ 0.32
Gm28557A0A087WQQ0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28557A0A087WQQ0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28557A0A087WQQ0 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28557A0A087WQQ0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Gm28557A0A087WQQ0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.06■□□□□ 0.32
Gm28557A0A087WQQ0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28557A0A087WQQ0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28557A0A087WQQ0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.06■□□□□ 0.32
Gm28557A0A087WQQ0 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28557A0A087WQQ0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28557A0A087WQQ0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28557A0A087WQQ0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28557A0A087WQQ0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28557A0A087WQQ0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28557A0A087WQQ0 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28557A0A087WQQ0 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Gm28557A0A087WQQ0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.05■□□□□ 0.32
Gm28557A0A087WQQ0 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.05■□□□□ 0.32
Gm28557A0A087WQQ0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Gm28557A0A087WQQ0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
Gm28557A0A087WQQ0 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28557A0A087WQQ0 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28557A0A087WQQ0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Gm28557A0A087WQQ0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28557A0A087WQQ0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28557A0A087WQQ0 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.05■□□□□ 0.32
Gm28557A0A087WQQ0 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.05■□□□□ 0.32
Gm28557A0A087WQQ0 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28557A0A087WQQ0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Gm28557A0A087WQQ0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28557A0A087WQQ0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28557A0A087WQQ0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.04■□□□□ 0.32
Gm28557A0A087WQQ0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.04■□□□□ 0.32
Gm28557A0A087WQQ0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28557A0A087WQQ0 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms